Protein–RNA interactions for Protein: Q8K3Y3

Lin28a, Protein lin-28 homolog A, mousemouse

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28aQ8K3Y3 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Lin28aQ8K3Y3 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lin28aQ8K3Y3 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lin28aQ8K3Y3 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lin28aQ8K3Y3 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lin28aQ8K3Y3 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lin28aQ8K3Y3 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.52□□□□□ -0.24
Lin28aQ8K3Y3 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Lin28aQ8K3Y3 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Lin28aQ8K3Y3 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lin28aQ8K3Y3 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.52□□□□□ -0.25
Lin28aQ8K3Y3 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.52□□□□□ -0.25
Lin28aQ8K3Y3 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.52□□□□□ -0.25
Lin28aQ8K3Y3 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lin28aQ8K3Y3 Gm6888-201ENSMUST00000221983 706 ntBASIC13.52□□□□□ -0.25
Lin28aQ8K3Y3 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.52□□□□□ -0.25
Lin28aQ8K3Y3 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lin28aQ8K3Y3 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.52□□□□□ -0.25
Lin28aQ8K3Y3 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lin28aQ8K3Y3 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lin28aQ8K3Y3 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lin28aQ8K3Y3 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.52□□□□□ -0.25
Lin28aQ8K3Y3 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lin28aQ8K3Y3 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lin28aQ8K3Y3 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Lin28aQ8K3Y3 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lin28aQ8K3Y3 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lin28aQ8K3Y3 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Lin28aQ8K3Y3 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lin28aQ8K3Y3 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Lin28aQ8K3Y3 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lin28aQ8K3Y3 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
Lin28aQ8K3Y3 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lin28aQ8K3Y3 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lin28aQ8K3Y3 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lin28aQ8K3Y3 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lin28aQ8K3Y3 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lin28aQ8K3Y3 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lin28aQ8K3Y3 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lin28aQ8K3Y3 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lin28aQ8K3Y3 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lin28aQ8K3Y3 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.51□□□□□ -0.25
Lin28aQ8K3Y3 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lin28aQ8K3Y3 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lin28aQ8K3Y3 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Lin28aQ8K3Y3 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.51□□□□□ -0.25
Lin28aQ8K3Y3 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lin28aQ8K3Y3 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lin28aQ8K3Y3 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lin28aQ8K3Y3 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lin28aQ8K3Y3 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lin28aQ8K3Y3 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lin28aQ8K3Y3 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lin28aQ8K3Y3 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.51□□□□□ -0.25
Lin28aQ8K3Y3 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lin28aQ8K3Y3 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.51□□□□□ -0.25
Lin28aQ8K3Y3 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Lin28aQ8K3Y3 Gm28630-201ENSMUST00000187806 498 ntBASIC13.51□□□□□ -0.25
Lin28aQ8K3Y3 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.51□□□□□ -0.25
Lin28aQ8K3Y3 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lin28aQ8K3Y3 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.51□□□□□ -0.25
Lin28aQ8K3Y3 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lin28aQ8K3Y3 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Lin28aQ8K3Y3 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lin28aQ8K3Y3 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lin28aQ8K3Y3 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lin28aQ8K3Y3 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lin28aQ8K3Y3 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lin28aQ8K3Y3 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lin28aQ8K3Y3 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lin28aQ8K3Y3 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Lin28aQ8K3Y3 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lin28aQ8K3Y3 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lin28aQ8K3Y3 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lin28aQ8K3Y3 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lin28aQ8K3Y3 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lin28aQ8K3Y3 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.51□□□□□ -0.25
Lin28aQ8K3Y3 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lin28aQ8K3Y3 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lin28aQ8K3Y3 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Lin28aQ8K3Y3 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Lin28aQ8K3Y3 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lin28aQ8K3Y3 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.5□□□□□ -0.25
Lin28aQ8K3Y3 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lin28aQ8K3Y3 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lin28aQ8K3Y3 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lin28aQ8K3Y3 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lin28aQ8K3Y3 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lin28aQ8K3Y3 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.5□□□□□ -0.25
Lin28aQ8K3Y3 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Lin28aQ8K3Y3 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.5□□□□□ -0.25
Lin28aQ8K3Y3 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Lin28aQ8K3Y3 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lin28aQ8K3Y3 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Lin28aQ8K3Y3 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Lin28aQ8K3Y3 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.5□□□□□ -0.25
Lin28aQ8K3Y3 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lin28aQ8K3Y3 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lin28aQ8K3Y3 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lin28aQ8K3Y3 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 103.8 ms