Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC17.1■□□□□ 0.33
Cchcr1Q8K2I2 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cchcr1Q8K2I2 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cchcr1Q8K2I2 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC17.1■□□□□ 0.33
Cchcr1Q8K2I2 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Cchcr1Q8K2I2 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cchcr1Q8K2I2 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cchcr1Q8K2I2 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cchcr1Q8K2I2 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Cchcr1Q8K2I2 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cchcr1Q8K2I2 Gm7229-201ENSMUST00000214719 1007 ntBASIC17.1■□□□□ 0.33
Cchcr1Q8K2I2 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cchcr1Q8K2I2 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cchcr1Q8K2I2 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC17.1■□□□□ 0.33
Cchcr1Q8K2I2 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cchcr1Q8K2I2 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Cchcr1Q8K2I2 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC17.1■□□□□ 0.33
Cchcr1Q8K2I2 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC17.1■□□□□ 0.33
Cchcr1Q8K2I2 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cchcr1Q8K2I2 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cchcr1Q8K2I2 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cchcr1Q8K2I2 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Cchcr1Q8K2I2 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cchcr1Q8K2I2 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cchcr1Q8K2I2 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cchcr1Q8K2I2 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cchcr1Q8K2I2 Gm10710-201ENSMUST00000047876 3971 ntBASIC17.1■□□□□ 0.33
Cchcr1Q8K2I2 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cchcr1Q8K2I2 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Cchcr1Q8K2I2 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC17.09■□□□□ 0.33
Cchcr1Q8K2I2 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cchcr1Q8K2I2 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cchcr1Q8K2I2 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Cchcr1Q8K2I2 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cchcr1Q8K2I2 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cchcr1Q8K2I2 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cchcr1Q8K2I2 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC17.09■□□□□ 0.33
Cchcr1Q8K2I2 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cchcr1Q8K2I2 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cchcr1Q8K2I2 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cchcr1Q8K2I2 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Cchcr1Q8K2I2 Gm9385-201ENSMUST00000117563 472 ntBASIC17.09■□□□□ 0.33
Cchcr1Q8K2I2 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cchcr1Q8K2I2 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC17.09■□□□□ 0.33
Cchcr1Q8K2I2 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Cchcr1Q8K2I2 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cchcr1Q8K2I2 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cchcr1Q8K2I2 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cchcr1Q8K2I2 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cchcr1Q8K2I2 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cchcr1Q8K2I2 Gm43399-201ENSMUST00000202546 2374 ntBASIC17.09■□□□□ 0.33
Cchcr1Q8K2I2 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Cchcr1Q8K2I2 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cchcr1Q8K2I2 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cchcr1Q8K2I2 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cchcr1Q8K2I2 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cchcr1Q8K2I2 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cchcr1Q8K2I2 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC17.08■□□□□ 0.33
Cchcr1Q8K2I2 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cchcr1Q8K2I2 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
Cchcr1Q8K2I2 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cchcr1Q8K2I2 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cchcr1Q8K2I2 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cchcr1Q8K2I2 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cchcr1Q8K2I2 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cchcr1Q8K2I2 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.08■□□□□ 0.32
Cchcr1Q8K2I2 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cchcr1Q8K2I2 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cchcr1Q8K2I2 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.08■□□□□ 0.32
Cchcr1Q8K2I2 Gm17968-201ENSMUST00000194902 784 ntBASIC17.08■□□□□ 0.32
Cchcr1Q8K2I2 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cchcr1Q8K2I2 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cchcr1Q8K2I2 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.08■□□□□ 0.32
Cchcr1Q8K2I2 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cchcr1Q8K2I2 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.08■□□□□ 0.32
Cchcr1Q8K2I2 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.08■□□□□ 0.32
Cchcr1Q8K2I2 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Cchcr1Q8K2I2 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cchcr1Q8K2I2 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC17.07■□□□□ 0.32
Cchcr1Q8K2I2 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Cchcr1Q8K2I2 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cchcr1Q8K2I2 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cchcr1Q8K2I2 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cchcr1Q8K2I2 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cchcr1Q8K2I2 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cchcr1Q8K2I2 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cchcr1Q8K2I2 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cchcr1Q8K2I2 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cchcr1Q8K2I2 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cchcr1Q8K2I2 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Cchcr1Q8K2I2 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC17.07■□□□□ 0.32
Cchcr1Q8K2I2 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cchcr1Q8K2I2 Gm9727-201ENSMUST00000161387 555 ntBASIC17.07■□□□□ 0.32
Cchcr1Q8K2I2 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cchcr1Q8K2I2 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.07■□□□□ 0.32
Cchcr1Q8K2I2 Gm44945-201ENSMUST00000206764 1187 ntBASIC17.07■□□□□ 0.32
Cchcr1Q8K2I2 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cchcr1Q8K2I2 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cchcr1Q8K2I2 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cchcr1Q8K2I2 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms