Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vcpip1Q8CDG3 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vcpip1Q8CDG3 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vcpip1Q8CDG3 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vcpip1Q8CDG3 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vcpip1Q8CDG3 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vcpip1Q8CDG3 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Vcpip1Q8CDG3 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vcpip1Q8CDG3 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vcpip1Q8CDG3 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vcpip1Q8CDG3 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vcpip1Q8CDG3 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Vcpip1Q8CDG3 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC15.54■□□□□ 0.08
Vcpip1Q8CDG3 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vcpip1Q8CDG3 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vcpip1Q8CDG3 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vcpip1Q8CDG3 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vcpip1Q8CDG3 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vcpip1Q8CDG3 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vcpip1Q8CDG3 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vcpip1Q8CDG3 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Vcpip1Q8CDG3 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Vcpip1Q8CDG3 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vcpip1Q8CDG3 Gm16198-201ENSMUST00000118766 670 ntBASIC15.54■□□□□ 0.08
Vcpip1Q8CDG3 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Vcpip1Q8CDG3 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vcpip1Q8CDG3 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Vcpip1Q8CDG3 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.54■□□□□ 0.08
Vcpip1Q8CDG3 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vcpip1Q8CDG3 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vcpip1Q8CDG3 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Vcpip1Q8CDG3 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vcpip1Q8CDG3 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Vcpip1Q8CDG3 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vcpip1Q8CDG3 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vcpip1Q8CDG3 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Vcpip1Q8CDG3 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vcpip1Q8CDG3 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vcpip1Q8CDG3 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vcpip1Q8CDG3 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Vcpip1Q8CDG3 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Vcpip1Q8CDG3 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vcpip1Q8CDG3 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vcpip1Q8CDG3 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vcpip1Q8CDG3 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vcpip1Q8CDG3 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vcpip1Q8CDG3 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Vcpip1Q8CDG3 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Vcpip1Q8CDG3 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Vcpip1Q8CDG3 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15.53■□□□□ 0.08
Vcpip1Q8CDG3 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vcpip1Q8CDG3 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.53■□□□□ 0.08
Vcpip1Q8CDG3 Gm26308-201ENSMUST00000157768 69 ntBASIC15.53■□□□□ 0.08
Vcpip1Q8CDG3 Auts2-212ENSMUST00000178555 309 ntBASIC15.53■□□□□ 0.08
Vcpip1Q8CDG3 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.53■□□□□ 0.08
Vcpip1Q8CDG3 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.53■□□□□ 0.08
Vcpip1Q8CDG3 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.53■□□□□ 0.08
Vcpip1Q8CDG3 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC15.53■□□□□ 0.08
Vcpip1Q8CDG3 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vcpip1Q8CDG3 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Vcpip1Q8CDG3 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.53■□□□□ 0.08
Vcpip1Q8CDG3 Gm10154-201ENSMUST00000084445 354 ntBASIC15.53■□□□□ 0.08
Vcpip1Q8CDG3 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vcpip1Q8CDG3 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Vcpip1Q8CDG3 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vcpip1Q8CDG3 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vcpip1Q8CDG3 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Vcpip1Q8CDG3 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vcpip1Q8CDG3 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vcpip1Q8CDG3 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Vcpip1Q8CDG3 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Vcpip1Q8CDG3 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Vcpip1Q8CDG3 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vcpip1Q8CDG3 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vcpip1Q8CDG3 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Vcpip1Q8CDG3 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Vcpip1Q8CDG3 AC166491.1-201ENSMUST00000227053 2308 ntBASIC15.52■□□□□ 0.08
Vcpip1Q8CDG3 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vcpip1Q8CDG3 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Vcpip1Q8CDG3 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vcpip1Q8CDG3 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vcpip1Q8CDG3 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vcpip1Q8CDG3 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vcpip1Q8CDG3 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vcpip1Q8CDG3 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vcpip1Q8CDG3 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vcpip1Q8CDG3 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vcpip1Q8CDG3 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vcpip1Q8CDG3 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vcpip1Q8CDG3 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Vcpip1Q8CDG3 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.52■□□□□ 0.08
Vcpip1Q8CDG3 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.52■□□□□ 0.08
Vcpip1Q8CDG3 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC15.52■□□□□ 0.08
Vcpip1Q8CDG3 Gm5177-201ENSMUST00000183092 997 ntBASIC15.52■□□□□ 0.08
Vcpip1Q8CDG3 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Vcpip1Q8CDG3 Thap2-203ENSMUST00000218989 527 ntBASIC15.52■□□□□ 0.08
Vcpip1Q8CDG3 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vcpip1Q8CDG3 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Vcpip1Q8CDG3 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vcpip1Q8CDG3 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms