Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SynpoQ8CC35 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SynpoQ8CC35 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SynpoQ8CC35 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SynpoQ8CC35 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SynpoQ8CC35 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SynpoQ8CC35 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SynpoQ8CC35 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SynpoQ8CC35 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14□□□□□ -0.17
SynpoQ8CC35 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SynpoQ8CC35 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SynpoQ8CC35 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14□□□□□ -0.17
SynpoQ8CC35 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14□□□□□ -0.17
SynpoQ8CC35 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SynpoQ8CC35 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SynpoQ8CC35 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14□□□□□ -0.17
SynpoQ8CC35 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14□□□□□ -0.17
SynpoQ8CC35 Gm12134-201ENSMUST00000122109 520 ntBASIC14□□□□□ -0.17
SynpoQ8CC35 Gm12017-201ENSMUST00000122453 1003 ntBASIC14□□□□□ -0.17
SynpoQ8CC35 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14□□□□□ -0.17
SynpoQ8CC35 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SynpoQ8CC35 Gm43474-201ENSMUST00000196415 774 ntBASIC14□□□□□ -0.17
SynpoQ8CC35 Gm43125-201ENSMUST00000201724 730 ntBASIC14□□□□□ -0.17
SynpoQ8CC35 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14□□□□□ -0.17
SynpoQ8CC35 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
SynpoQ8CC35 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14□□□□□ -0.17
SynpoQ8CC35 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SynpoQ8CC35 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14□□□□□ -0.17
SynpoQ8CC35 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SynpoQ8CC35 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC14□□□□□ -0.17
SynpoQ8CC35 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SynpoQ8CC35 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SynpoQ8CC35 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14□□□□□ -0.17
SynpoQ8CC35 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
SynpoQ8CC35 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14□□□□□ -0.17
SynpoQ8CC35 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14□□□□□ -0.17
SynpoQ8CC35 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SynpoQ8CC35 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SynpoQ8CC35 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.99□□□□□ -0.17
SynpoQ8CC35 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SynpoQ8CC35 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SynpoQ8CC35 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SynpoQ8CC35 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SynpoQ8CC35 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
SynpoQ8CC35 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SynpoQ8CC35 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SynpoQ8CC35 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SynpoQ8CC35 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SynpoQ8CC35 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SynpoQ8CC35 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SynpoQ8CC35 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.99□□□□□ -0.17
SynpoQ8CC35 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SynpoQ8CC35 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.99□□□□□ -0.17
SynpoQ8CC35 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.99□□□□□ -0.17
SynpoQ8CC35 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.99□□□□□ -0.17
SynpoQ8CC35 Gm18057-201ENSMUST00000208220 503 ntBASIC13.99□□□□□ -0.17
SynpoQ8CC35 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.99□□□□□ -0.17
SynpoQ8CC35 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.99□□□□□ -0.17
SynpoQ8CC35 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.99□□□□□ -0.17
SynpoQ8CC35 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SynpoQ8CC35 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.99□□□□□ -0.17
SynpoQ8CC35 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
SynpoQ8CC35 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SynpoQ8CC35 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SynpoQ8CC35 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SynpoQ8CC35 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
SynpoQ8CC35 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SynpoQ8CC35 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SynpoQ8CC35 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SynpoQ8CC35 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SynpoQ8CC35 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SynpoQ8CC35 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SynpoQ8CC35 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SynpoQ8CC35 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SynpoQ8CC35 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SynpoQ8CC35 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
SynpoQ8CC35 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SynpoQ8CC35 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SynpoQ8CC35 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SynpoQ8CC35 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SynpoQ8CC35 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SynpoQ8CC35 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SynpoQ8CC35 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SynpoQ8CC35 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SynpoQ8CC35 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SynpoQ8CC35 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SynpoQ8CC35 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SynpoQ8CC35 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SynpoQ8CC35 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SynpoQ8CC35 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SynpoQ8CC35 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
SynpoQ8CC35 Gm14057-201ENSMUST00000120631 482 ntBASIC13.98□□□□□ -0.17
SynpoQ8CC35 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SynpoQ8CC35 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SynpoQ8CC35 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SynpoQ8CC35 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.98□□□□□ -0.17
SynpoQ8CC35 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.98□□□□□ -0.17
SynpoQ8CC35 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SynpoQ8CC35 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SynpoQ8CC35 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms