Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trnp1Q80ZI1 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trnp1Q80ZI1 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trnp1Q80ZI1 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trnp1Q80ZI1 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trnp1Q80ZI1 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trnp1Q80ZI1 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trnp1Q80ZI1 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trnp1Q80ZI1 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trnp1Q80ZI1 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trnp1Q80ZI1 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
Trnp1Q80ZI1 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC16.14■□□□□ 0.18
Trnp1Q80ZI1 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trnp1Q80ZI1 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trnp1Q80ZI1 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trnp1Q80ZI1 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trnp1Q80ZI1 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trnp1Q80ZI1 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC16.14■□□□□ 0.17
Trnp1Q80ZI1 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.14■□□□□ 0.17
Trnp1Q80ZI1 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trnp1Q80ZI1 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trnp1Q80ZI1 Gm24644-201ENSMUST00000157114 139 ntBASIC16.14■□□□□ 0.17
Trnp1Q80ZI1 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC16.14■□□□□ 0.17
Trnp1Q80ZI1 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trnp1Q80ZI1 Gm40466-201ENSMUST00000212174 422 ntBASIC16.14■□□□□ 0.17
Trnp1Q80ZI1 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC16.14■□□□□ 0.17
Trnp1Q80ZI1 Gm18027-201ENSMUST00000218947 619 ntBASIC16.14■□□□□ 0.17
Trnp1Q80ZI1 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trnp1Q80ZI1 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trnp1Q80ZI1 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Trnp1Q80ZI1 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trnp1Q80ZI1 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trnp1Q80ZI1 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trnp1Q80ZI1 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trnp1Q80ZI1 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trnp1Q80ZI1 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Trnp1Q80ZI1 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.13■□□□□ 0.17
Trnp1Q80ZI1 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trnp1Q80ZI1 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trnp1Q80ZI1 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trnp1Q80ZI1 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Trnp1Q80ZI1 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Trnp1Q80ZI1 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trnp1Q80ZI1 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trnp1Q80ZI1 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trnp1Q80ZI1 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trnp1Q80ZI1 Gm13385-201ENSMUST00000121089 220 ntBASIC16.13■□□□□ 0.17
Trnp1Q80ZI1 Gm16342-201ENSMUST00000124025 1025 ntBASIC16.13■□□□□ 0.17
Trnp1Q80ZI1 Gm8801-201ENSMUST00000173255 1064 ntBASIC16.13■□□□□ 0.17
Trnp1Q80ZI1 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trnp1Q80ZI1 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trnp1Q80ZI1 Gm38671-201ENSMUST00000200573 130 ntBASIC16.13■□□□□ 0.17
Trnp1Q80ZI1 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trnp1Q80ZI1 Gm18054-201ENSMUST00000207539 555 ntBASIC16.13■□□□□ 0.17
Trnp1Q80ZI1 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC16.13■□□□□ 0.17
Trnp1Q80ZI1 CT009713.10-202ENSMUST00000225734 696 ntBASIC16.13■□□□□ 0.17
Trnp1Q80ZI1 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trnp1Q80ZI1 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Trnp1Q80ZI1 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trnp1Q80ZI1 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trnp1Q80ZI1 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trnp1Q80ZI1 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trnp1Q80ZI1 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trnp1Q80ZI1 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC16.13■□□□□ 0.17
Trnp1Q80ZI1 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trnp1Q80ZI1 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trnp1Q80ZI1 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trnp1Q80ZI1 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trnp1Q80ZI1 Gm21038-201ENSMUST00000222205 1383 ntBASIC16.13■□□□□ 0.17
Trnp1Q80ZI1 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trnp1Q80ZI1 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.13■□□□□ 0.17
Trnp1Q80ZI1 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trnp1Q80ZI1 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trnp1Q80ZI1 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC16.12■□□□□ 0.17
Trnp1Q80ZI1 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Trnp1Q80ZI1 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trnp1Q80ZI1 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trnp1Q80ZI1 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC16.12■□□□□ 0.17
Trnp1Q80ZI1 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trnp1Q80ZI1 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Trnp1Q80ZI1 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trnp1Q80ZI1 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Trnp1Q80ZI1 Gm12329-201ENSMUST00000120829 1007 ntBASIC16.12■□□□□ 0.17
Trnp1Q80ZI1 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC16.12■□□□□ 0.17
Trnp1Q80ZI1 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trnp1Q80ZI1 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC16.12■□□□□ 0.17
Trnp1Q80ZI1 Gm43818-201ENSMUST00000200605 466 ntBASIC16.12■□□□□ 0.17
Trnp1Q80ZI1 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trnp1Q80ZI1 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC16.12■□□□□ 0.17
Trnp1Q80ZI1 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trnp1Q80ZI1 AC139350.3-201ENSMUST00000226151 420 ntBASIC16.12■□□□□ 0.17
Trnp1Q80ZI1 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC16.12■□□□□ 0.17
Trnp1Q80ZI1 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC16.12■□□□□ 0.17
Trnp1Q80ZI1 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trnp1Q80ZI1 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trnp1Q80ZI1 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trnp1Q80ZI1 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trnp1Q80ZI1 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trnp1Q80ZI1 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trnp1Q80ZI1 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms