Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ttc28Q80XJ3 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ttc28Q80XJ3 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.06□□□□□ -0.48
Ttc28Q80XJ3 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Ttc28Q80XJ3 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ttc28Q80XJ3 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.06□□□□□ -0.48
Ttc28Q80XJ3 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.06□□□□□ -0.48
Ttc28Q80XJ3 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ttc28Q80XJ3 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ttc28Q80XJ3 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.06□□□□□ -0.48
Ttc28Q80XJ3 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ttc28Q80XJ3 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ttc28Q80XJ3 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ttc28Q80XJ3 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ttc28Q80XJ3 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ttc28Q80XJ3 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Ttc28Q80XJ3 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.06□□□□□ -0.48
Ttc28Q80XJ3 Gm5187-201ENSMUST00000117317 991 ntBASIC12.05□□□□□ -0.48
Ttc28Q80XJ3 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ttc28Q80XJ3 Gm11814-201ENSMUST00000119515 929 ntBASIC12.05□□□□□ -0.48
Ttc28Q80XJ3 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ttc28Q80XJ3 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Ttc28Q80XJ3 Gm27514-201ENSMUST00000183692 110 ntBASIC12.05□□□□□ -0.48
Ttc28Q80XJ3 Gm27839-201ENSMUST00000184242 106 ntBASIC12.05□□□□□ -0.48
Ttc28Q80XJ3 Gm27486-201ENSMUST00000184923 80 ntBASIC12.05□□□□□ -0.48
Ttc28Q80XJ3 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.05□□□□□ -0.48
Ttc28Q80XJ3 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ttc28Q80XJ3 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ttc28Q80XJ3 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ttc28Q80XJ3 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ttc28Q80XJ3 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.05□□□□□ -0.48
Ttc28Q80XJ3 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ttc28Q80XJ3 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ttc28Q80XJ3 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ttc28Q80XJ3 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.05□□□□□ -0.48
Ttc28Q80XJ3 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ttc28Q80XJ3 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.05□□□□□ -0.48
Ttc28Q80XJ3 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ttc28Q80XJ3 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ttc28Q80XJ3 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ttc28Q80XJ3 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ttc28Q80XJ3 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ttc28Q80XJ3 Gm14723-201ENSMUST00000118686 215 ntBASIC12.05□□□□□ -0.48
Ttc28Q80XJ3 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.05□□□□□ -0.48
Ttc28Q80XJ3 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.05□□□□□ -0.48
Ttc28Q80XJ3 Gm6983-201ENSMUST00000214912 628 ntBASIC12.05□□□□□ -0.48
Ttc28Q80XJ3 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.05□□□□□ -0.48
Ttc28Q80XJ3 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.05□□□□□ -0.48
Ttc28Q80XJ3 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ttc28Q80XJ3 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ttc28Q80XJ3 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ttc28Q80XJ3 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ttc28Q80XJ3 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ttc28Q80XJ3 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ttc28Q80XJ3 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ttc28Q80XJ3 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ttc28Q80XJ3 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ttc28Q80XJ3 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ttc28Q80XJ3 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ttc28Q80XJ3 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ttc28Q80XJ3 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ttc28Q80XJ3 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.04□□□□□ -0.48
Ttc28Q80XJ3 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ttc28Q80XJ3 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ttc28Q80XJ3 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ttc28Q80XJ3 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.04□□□□□ -0.48
Ttc28Q80XJ3 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.04□□□□□ -0.48
Ttc28Q80XJ3 Gm8652-201ENSMUST00000181363 964 ntBASIC12.04□□□□□ -0.48
Ttc28Q80XJ3 Gm7593-201ENSMUST00000187246 644 ntBASIC12.04□□□□□ -0.48
Ttc28Q80XJ3 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.04□□□□□ -0.48
Ttc28Q80XJ3 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.04□□□□□ -0.48
Ttc28Q80XJ3 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.04□□□□□ -0.48
Ttc28Q80XJ3 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ttc28Q80XJ3 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ttc28Q80XJ3 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ttc28Q80XJ3 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ttc28Q80XJ3 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ttc28Q80XJ3 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ttc28Q80XJ3 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ttc28Q80XJ3 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.04□□□□□ -0.48
Ttc28Q80XJ3 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.04□□□□□ -0.48
Ttc28Q80XJ3 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ttc28Q80XJ3 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ttc28Q80XJ3 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ttc28Q80XJ3 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ttc28Q80XJ3 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.04□□□□□ -0.48
Ttc28Q80XJ3 Gm37466-201ENSMUST00000195692 652 ntBASIC12.04□□□□□ -0.48
Ttc28Q80XJ3 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.04□□□□□ -0.48
Ttc28Q80XJ3 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.04□□□□□ -0.48
Ttc28Q80XJ3 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ttc28Q80XJ3 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC12.04□□□□□ -0.48
Ttc28Q80XJ3 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.04□□□□□ -0.48
Ttc28Q80XJ3 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ttc28Q80XJ3 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ttc28Q80XJ3 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.04□□□□□ -0.48
Ttc28Q80XJ3 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ttc28Q80XJ3 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ttc28Q80XJ3 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Ttc28Q80XJ3 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.03□□□□□ -0.48
Ttc28Q80XJ3 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms