Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc116Q80X53 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc116Q80X53 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc116Q80X53 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc116Q80X53 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc116Q80X53 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc116Q80X53 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc116Q80X53 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.16□□□□□ -0.14
Ccdc116Q80X53 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc116Q80X53 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
Ccdc116Q80X53 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc116Q80X53 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc116Q80X53 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc116Q80X53 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc116Q80X53 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc116Q80X53 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc116Q80X53 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc116Q80X53 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.16□□□□□ -0.14
Ccdc116Q80X53 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.16□□□□□ -0.14
Ccdc116Q80X53 Gm27525-201ENSMUST00000184465 107 ntBASIC14.16□□□□□ -0.14
Ccdc116Q80X53 Mir8117-201ENSMUST00000184773 107 ntBASIC14.16□□□□□ -0.14
Ccdc116Q80X53 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc116Q80X53 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc116Q80X53 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc116Q80X53 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc116Q80X53 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc116Q80X53 Gm10175-201ENSMUST00000086013 645 ntBASIC14.16□□□□□ -0.14
Ccdc116Q80X53 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc116Q80X53 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc116Q80X53 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc116Q80X53 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc116Q80X53 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc116Q80X53 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc116Q80X53 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc116Q80X53 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc116Q80X53 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc116Q80X53 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
Ccdc116Q80X53 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ccdc116Q80X53 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc116Q80X53 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc116Q80X53 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ccdc116Q80X53 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.15□□□□□ -0.14
Ccdc116Q80X53 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc116Q80X53 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc116Q80X53 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.15□□□□□ -0.14
Ccdc116Q80X53 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.15□□□□□ -0.14
Ccdc116Q80X53 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc116Q80X53 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ccdc116Q80X53 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc116Q80X53 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc116Q80X53 Mir3113-201ENSMUST00000175478 76 ntBASIC14.15□□□□□ -0.14
Ccdc116Q80X53 Gm27920-201ENSMUST00000183953 96 ntBASIC14.15□□□□□ -0.14
Ccdc116Q80X53 Gm18206-201ENSMUST00000207027 926 ntBASIC14.15□□□□□ -0.14
Ccdc116Q80X53 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.15□□□□□ -0.14
Ccdc116Q80X53 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc116Q80X53 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc116Q80X53 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc116Q80X53 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc116Q80X53 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc116Q80X53 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ccdc116Q80X53 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc116Q80X53 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc116Q80X53 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc116Q80X53 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc116Q80X53 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.15□□□□□ -0.14
Ccdc116Q80X53 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc116Q80X53 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
Ccdc116Q80X53 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Ccdc116Q80X53 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc116Q80X53 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc116Q80X53 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ccdc116Q80X53 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc116Q80X53 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc116Q80X53 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.14□□□□□ -0.15
Ccdc116Q80X53 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Ccdc116Q80X53 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc116Q80X53 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc116Q80X53 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc116Q80X53 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc116Q80X53 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Ccdc116Q80X53 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc116Q80X53 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc116Q80X53 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc116Q80X53 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc116Q80X53 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc116Q80X53 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc116Q80X53 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc116Q80X53 Gm14494-201ENSMUST00000118786 435 ntBASIC14.14□□□□□ -0.15
Ccdc116Q80X53 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc116Q80X53 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.14□□□□□ -0.15
Ccdc116Q80X53 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.14□□□□□ -0.15
Ccdc116Q80X53 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.14□□□□□ -0.15
Ccdc116Q80X53 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc116Q80X53 Gm9182-201ENSMUST00000217829 639 ntBASIC14.14□□□□□ -0.15
Ccdc116Q80X53 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc116Q80X53 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc116Q80X53 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc116Q80X53 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc116Q80X53 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc116Q80X53 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms