Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scaf4Q6PFF0 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Scaf4Q6PFF0 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scaf4Q6PFF0 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scaf4Q6PFF0 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scaf4Q6PFF0 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scaf4Q6PFF0 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.27□□□□□ -0.12
Scaf4Q6PFF0 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scaf4Q6PFF0 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Scaf4Q6PFF0 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Scaf4Q6PFF0 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scaf4Q6PFF0 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.27□□□□□ -0.12
Scaf4Q6PFF0 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.27□□□□□ -0.12
Scaf4Q6PFF0 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Scaf4Q6PFF0 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.27□□□□□ -0.13
Scaf4Q6PFF0 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scaf4Q6PFF0 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Scaf4Q6PFF0 Gm4899-201ENSMUST00000178708 719 ntBASIC14.27□□□□□ -0.13
Scaf4Q6PFF0 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Scaf4Q6PFF0 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scaf4Q6PFF0 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scaf4Q6PFF0 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scaf4Q6PFF0 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Scaf4Q6PFF0 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Scaf4Q6PFF0 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.27□□□□□ -0.13
Scaf4Q6PFF0 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Scaf4Q6PFF0 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Scaf4Q6PFF0 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scaf4Q6PFF0 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scaf4Q6PFF0 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scaf4Q6PFF0 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Scaf4Q6PFF0 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scaf4Q6PFF0 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scaf4Q6PFF0 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scaf4Q6PFF0 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scaf4Q6PFF0 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scaf4Q6PFF0 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scaf4Q6PFF0 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scaf4Q6PFF0 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scaf4Q6PFF0 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scaf4Q6PFF0 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Scaf4Q6PFF0 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scaf4Q6PFF0 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.26□□□□□ -0.13
Scaf4Q6PFF0 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scaf4Q6PFF0 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scaf4Q6PFF0 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scaf4Q6PFF0 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Scaf4Q6PFF0 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scaf4Q6PFF0 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.26□□□□□ -0.13
Scaf4Q6PFF0 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.26□□□□□ -0.13
Scaf4Q6PFF0 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.26□□□□□ -0.13
Scaf4Q6PFF0 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scaf4Q6PFF0 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Scaf4Q6PFF0 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.26□□□□□ -0.13
Scaf4Q6PFF0 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.26□□□□□ -0.13
Scaf4Q6PFF0 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scaf4Q6PFF0 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.26□□□□□ -0.13
Scaf4Q6PFF0 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scaf4Q6PFF0 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scaf4Q6PFF0 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.26□□□□□ -0.13
Scaf4Q6PFF0 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scaf4Q6PFF0 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.26□□□□□ -0.13
Scaf4Q6PFF0 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.26□□□□□ -0.13
Scaf4Q6PFF0 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scaf4Q6PFF0 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scaf4Q6PFF0 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scaf4Q6PFF0 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Scaf4Q6PFF0 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scaf4Q6PFF0 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scaf4Q6PFF0 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scaf4Q6PFF0 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Scaf4Q6PFF0 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scaf4Q6PFF0 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Scaf4Q6PFF0 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Scaf4Q6PFF0 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scaf4Q6PFF0 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.25□□□□□ -0.13
Scaf4Q6PFF0 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scaf4Q6PFF0 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.25□□□□□ -0.13
Scaf4Q6PFF0 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scaf4Q6PFF0 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Scaf4Q6PFF0 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scaf4Q6PFF0 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scaf4Q6PFF0 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.25□□□□□ -0.13
Scaf4Q6PFF0 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Scaf4Q6PFF0 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scaf4Q6PFF0 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scaf4Q6PFF0 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scaf4Q6PFF0 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scaf4Q6PFF0 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scaf4Q6PFF0 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scaf4Q6PFF0 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scaf4Q6PFF0 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scaf4Q6PFF0 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.25□□□□□ -0.13
Scaf4Q6PFF0 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.25□□□□□ -0.13
Scaf4Q6PFF0 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scaf4Q6PFF0 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scaf4Q6PFF0 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scaf4Q6PFF0 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Scaf4Q6PFF0 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scaf4Q6PFF0 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms