Protein–RNA interactions for Protein: Q6PEM8

Slc46a1, Proton-coupled folate transporter, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a1Q6PEM8 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc46a1Q6PEM8 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc46a1Q6PEM8 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Slc46a1Q6PEM8 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Slc46a1Q6PEM8 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.74□□□□□ -0.37
Slc46a1Q6PEM8 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc46a1Q6PEM8 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Slc46a1Q6PEM8 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc46a1Q6PEM8 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc46a1Q6PEM8 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc46a1Q6PEM8 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc46a1Q6PEM8 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc46a1Q6PEM8 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.74□□□□□ -0.37
Slc46a1Q6PEM8 Gm12428-201ENSMUST00000119844 727 ntBASIC12.74□□□□□ -0.37
Slc46a1Q6PEM8 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Slc46a1Q6PEM8 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Slc46a1Q6PEM8 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Slc46a1Q6PEM8 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc46a1Q6PEM8 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc46a1Q6PEM8 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Slc46a1Q6PEM8 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Slc46a1Q6PEM8 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Slc46a1Q6PEM8 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc46a1Q6PEM8 Mir6977-201ENSMUST00000184960 64 ntBASIC12.74□□□□□ -0.37
Slc46a1Q6PEM8 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Slc46a1Q6PEM8 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc46a1Q6PEM8 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc46a1Q6PEM8 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc46a1Q6PEM8 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Slc46a1Q6PEM8 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.74□□□□□ -0.37
Slc46a1Q6PEM8 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc46a1Q6PEM8 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Slc46a1Q6PEM8 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
Slc46a1Q6PEM8 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Slc46a1Q6PEM8 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.74□□□□□ -0.37
Slc46a1Q6PEM8 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.74□□□□□ -0.37
Slc46a1Q6PEM8 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Slc46a1Q6PEM8 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc46a1Q6PEM8 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc46a1Q6PEM8 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc46a1Q6PEM8 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.73□□□□□ -0.37
Slc46a1Q6PEM8 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc46a1Q6PEM8 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc46a1Q6PEM8 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.73□□□□□ -0.37
Slc46a1Q6PEM8 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc46a1Q6PEM8 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc46a1Q6PEM8 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Slc46a1Q6PEM8 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Slc46a1Q6PEM8 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Slc46a1Q6PEM8 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc46a1Q6PEM8 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc46a1Q6PEM8 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Slc46a1Q6PEM8 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc46a1Q6PEM8 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.73□□□□□ -0.37
Slc46a1Q6PEM8 Gm13453-201ENSMUST00000118708 357 ntBASIC12.73□□□□□ -0.37
Slc46a1Q6PEM8 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Slc46a1Q6PEM8 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.73□□□□□ -0.37
Slc46a1Q6PEM8 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Slc46a1Q6PEM8 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.73□□□□□ -0.37
Slc46a1Q6PEM8 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.73□□□□□ -0.37
Slc46a1Q6PEM8 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.73□□□□□ -0.37
Slc46a1Q6PEM8 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.73□□□□□ -0.37
Slc46a1Q6PEM8 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc46a1Q6PEM8 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc46a1Q6PEM8 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
Slc46a1Q6PEM8 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc46a1Q6PEM8 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc46a1Q6PEM8 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.73□□□□□ -0.37
Slc46a1Q6PEM8 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Slc46a1Q6PEM8 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc46a1Q6PEM8 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc46a1Q6PEM8 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc46a1Q6PEM8 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc46a1Q6PEM8 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc46a1Q6PEM8 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc46a1Q6PEM8 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.72□□□□□ -0.37
Slc46a1Q6PEM8 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.72□□□□□ -0.37
Slc46a1Q6PEM8 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.72□□□□□ -0.37
Slc46a1Q6PEM8 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc46a1Q6PEM8 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc46a1Q6PEM8 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Slc46a1Q6PEM8 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Slc46a1Q6PEM8 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.72□□□□□ -0.37
Slc46a1Q6PEM8 Gm5479-201ENSMUST00000160578 435 ntBASIC12.72□□□□□ -0.37
Slc46a1Q6PEM8 Gm25144-201ENSMUST00000179561 110 ntBASIC12.72□□□□□ -0.37
Slc46a1Q6PEM8 Gm25352-201ENSMUST00000179815 110 ntBASIC12.72□□□□□ -0.37
Slc46a1Q6PEM8 Gm28630-201ENSMUST00000187806 498 ntBASIC12.72□□□□□ -0.37
Slc46a1Q6PEM8 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc46a1Q6PEM8 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.72□□□□□ -0.37
Slc46a1Q6PEM8 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Slc46a1Q6PEM8 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc46a1Q6PEM8 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc46a1Q6PEM8 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc46a1Q6PEM8 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc46a1Q6PEM8 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Slc46a1Q6PEM8 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Slc46a1Q6PEM8 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc46a1Q6PEM8 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc46a1Q6PEM8 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc46a1Q6PEM8 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms