Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
VclQ64727 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
VclQ64727 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.22□□□□□ -0.13
VclQ64727 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
VclQ64727 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
VclQ64727 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VclQ64727 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.22□□□□□ -0.13
VclQ64727 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VclQ64727 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
VclQ64727 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VclQ64727 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
VclQ64727 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
VclQ64727 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
VclQ64727 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VclQ64727 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
VclQ64727 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
VclQ64727 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
VclQ64727 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VclQ64727 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
VclQ64727 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
VclQ64727 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VclQ64727 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VclQ64727 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VclQ64727 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
VclQ64727 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
VclQ64727 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.21□□□□□ -0.13
VclQ64727 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VclQ64727 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VclQ64727 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VclQ64727 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.21□□□□□ -0.13
VclQ64727 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
VclQ64727 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.21□□□□□ -0.13
VclQ64727 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.21□□□□□ -0.13
VclQ64727 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VclQ64727 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
VclQ64727 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VclQ64727 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
VclQ64727 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VclQ64727 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
VclQ64727 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
VclQ64727 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
VclQ64727 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
VclQ64727 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
VclQ64727 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VclQ64727 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
VclQ64727 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VclQ64727 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VclQ64727 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VclQ64727 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
VclQ64727 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VclQ64727 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VclQ64727 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VclQ64727 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VclQ64727 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.2□□□□□ -0.14
VclQ64727 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
VclQ64727 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VclQ64727 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.2□□□□□ -0.14
VclQ64727 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
VclQ64727 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VclQ64727 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VclQ64727 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
VclQ64727 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
VclQ64727 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VclQ64727 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.2□□□□□ -0.14
VclQ64727 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VclQ64727 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.2□□□□□ -0.14
VclQ64727 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VclQ64727 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.2□□□□□ -0.14
VclQ64727 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VclQ64727 Gm5779-201ENSMUST00000218467 910 ntBASIC14.2□□□□□ -0.14
VclQ64727 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VclQ64727 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VclQ64727 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VclQ64727 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VclQ64727 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
VclQ64727 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VclQ64727 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.2□□□□□ -0.14
VclQ64727 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
VclQ64727 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VclQ64727 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VclQ64727 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
VclQ64727 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VclQ64727 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VclQ64727 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VclQ64727 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VclQ64727 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
VclQ64727 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VclQ64727 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VclQ64727 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VclQ64727 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
VclQ64727 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VclQ64727 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
VclQ64727 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
VclQ64727 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VclQ64727 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
VclQ64727 Gm8410-201ENSMUST00000117225 605 ntBASIC14.19□□□□□ -0.14
VclQ64727 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VclQ64727 Gm22175-201ENSMUST00000175007 78 ntBASIC14.19□□□□□ -0.14
VclQ64727 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VclQ64727 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms