Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Foxc1Q61572 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Foxc1Q61572 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Foxc1Q61572 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Foxc1Q61572 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Foxc1Q61572 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Foxc1Q61572 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Foxc1Q61572 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Foxc1Q61572 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Foxc1Q61572 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC10.71□□□□□ -0.69
Foxc1Q61572 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Foxc1Q61572 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC10.71□□□□□ -0.69
Foxc1Q61572 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Foxc1Q61572 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Foxc1Q61572 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Foxc1Q61572 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC10.71□□□□□ -0.69
Foxc1Q61572 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC10.71□□□□□ -0.69
Foxc1Q61572 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC10.71□□□□□ -0.69
Foxc1Q61572 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.71□□□□□ -0.69
Foxc1Q61572 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Foxc1Q61572 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Foxc1Q61572 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
Foxc1Q61572 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Foxc1Q61572 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC10.71□□□□□ -0.69
Foxc1Q61572 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Foxc1Q61572 Gm5177-201ENSMUST00000183092 997 ntBASIC10.71□□□□□ -0.69
Foxc1Q61572 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Foxc1Q61572 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
Foxc1Q61572 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC10.71□□□□□ -0.69
Foxc1Q61572 AC025913.2-201ENSMUST00000220136 1766 ntBASIC10.71□□□□□ -0.69
Foxc1Q61572 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Foxc1Q61572 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Foxc1Q61572 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Foxc1Q61572 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Foxc1Q61572 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Foxc1Q61572 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Foxc1Q61572 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC10.71□□□□□ -0.69
Foxc1Q61572 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Foxc1Q61572 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Foxc1Q61572 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Foxc1Q61572 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Foxc1Q61572 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC10.7□□□□□ -0.7
Foxc1Q61572 AC130669.1-201ENSMUST00000228537 1672 ntBASIC10.7□□□□□ -0.7
Foxc1Q61572 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Foxc1Q61572 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
Foxc1Q61572 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Foxc1Q61572 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Foxc1Q61572 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Foxc1Q61572 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Foxc1Q61572 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Foxc1Q61572 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Foxc1Q61572 AC174678.1-201ENSMUST00000228007 2749 ntBASIC10.7□□□□□ -0.7
Foxc1Q61572 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Foxc1Q61572 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Foxc1Q61572 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Foxc1Q61572 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC10.7□□□□□ -0.7
Foxc1Q61572 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC10.7□□□□□ -0.7
Foxc1Q61572 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Foxc1Q61572 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Foxc1Q61572 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Foxc1Q61572 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC10.7□□□□□ -0.7
Foxc1Q61572 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Foxc1Q61572 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Foxc1Q61572 Csnk1a1-208ENSMUST00000167187 1222 ntTSL 5 BASIC10.7□□□□□ -0.7
Foxc1Q61572 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Foxc1Q61572 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Foxc1Q61572 Gm7063-201ENSMUST00000186840 981 ntBASIC10.7□□□□□ -0.7
Foxc1Q61572 Gm44492-201ENSMUST00000197012 141 ntBASIC10.7□□□□□ -0.7
Foxc1Q61572 Mir670hg-205ENSMUST00000210851 1148 ntTSL 5 BASIC10.7□□□□□ -0.7
Foxc1Q61572 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Foxc1Q61572 Chchd1-203ENSMUST00000224633 557 ntBASIC10.7□□□□□ -0.7
Foxc1Q61572 AC165260.5-201ENSMUST00000224640 1247 ntBASIC10.7□□□□□ -0.7
Foxc1Q61572 AC124549.3-201ENSMUST00000225541 367 ntBASIC10.7□□□□□ -0.7
Foxc1Q61572 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Foxc1Q61572 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Foxc1Q61572 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Foxc1Q61572 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Foxc1Q61572 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC10.7□□□□□ -0.7
Foxc1Q61572 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Foxc1Q61572 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Foxc1Q61572 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Foxc1Q61572 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Foxc1Q61572 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Foxc1Q61572 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Foxc1Q61572 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Foxc1Q61572 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Foxc1Q61572 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC10.7□□□□□ -0.7
Foxc1Q61572 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Foxc1Q61572 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
Foxc1Q61572 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Foxc1Q61572 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Foxc1Q61572 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Foxc1Q61572 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Foxc1Q61572 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Foxc1Q61572 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Foxc1Q61572 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Foxc1Q61572 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Foxc1Q61572 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Foxc1Q61572 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
Foxc1Q61572 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms