Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vsx2Q61412 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vsx2Q61412 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vsx2Q61412 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.12□□□□□ -0.15
Vsx2Q61412 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Vsx2Q61412 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.12□□□□□ -0.15
Vsx2Q61412 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.12□□□□□ -0.15
Vsx2Q61412 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Vsx2Q61412 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vsx2Q61412 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vsx2Q61412 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vsx2Q61412 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.12□□□□□ -0.15
Vsx2Q61412 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Vsx2Q61412 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Vsx2Q61412 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vsx2Q61412 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vsx2Q61412 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.12□□□□□ -0.15
Vsx2Q61412 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Vsx2Q61412 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vsx2Q61412 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vsx2Q61412 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
Vsx2Q61412 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.12□□□□□ -0.15
Vsx2Q61412 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.12□□□□□ -0.15
Vsx2Q61412 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.12□□□□□ -0.15
Vsx2Q61412 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vsx2Q61412 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vsx2Q61412 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vsx2Q61412 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vsx2Q61412 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vsx2Q61412 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vsx2Q61412 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Vsx2Q61412 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vsx2Q61412 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vsx2Q61412 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vsx2Q61412 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vsx2Q61412 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Vsx2Q61412 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vsx2Q61412 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Vsx2Q61412 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vsx2Q61412 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vsx2Q61412 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vsx2Q61412 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vsx2Q61412 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vsx2Q61412 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.11□□□□□ -0.15
Vsx2Q61412 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Vsx2Q61412 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Vsx2Q61412 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vsx2Q61412 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vsx2Q61412 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vsx2Q61412 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vsx2Q61412 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vsx2Q61412 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Vsx2Q61412 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Vsx2Q61412 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vsx2Q61412 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vsx2Q61412 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vsx2Q61412 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Vsx2Q61412 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vsx2Q61412 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vsx2Q61412 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Vsx2Q61412 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Vsx2Q61412 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vsx2Q61412 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vsx2Q61412 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.1□□□□□ -0.15
Vsx2Q61412 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vsx2Q61412 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Vsx2Q61412 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vsx2Q61412 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vsx2Q61412 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vsx2Q61412 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vsx2Q61412 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Vsx2Q61412 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vsx2Q61412 Gm13365-201ENSMUST00000121188 973 ntBASIC14.1□□□□□ -0.15
Vsx2Q61412 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.1□□□□□ -0.15
Vsx2Q61412 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vsx2Q61412 Rprl2-201ENSMUST00000157150 290 ntBASIC14.1□□□□□ -0.15
Vsx2Q61412 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.1□□□□□ -0.15
Vsx2Q61412 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.1□□□□□ -0.15
Vsx2Q61412 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vsx2Q61412 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vsx2Q61412 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.1□□□□□ -0.15
Vsx2Q61412 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vsx2Q61412 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vsx2Q61412 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vsx2Q61412 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vsx2Q61412 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vsx2Q61412 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vsx2Q61412 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.1□□□□□ -0.15
Vsx2Q61412 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vsx2Q61412 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vsx2Q61412 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vsx2Q61412 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vsx2Q61412 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vsx2Q61412 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vsx2Q61412 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vsx2Q61412 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vsx2Q61412 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Vsx2Q61412 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vsx2Q61412 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Vsx2Q61412 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms