Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav5d-4Q5R1F6 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav5d-4Q5R1F6 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav5d-4Q5R1F6 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav5d-4Q5R1F6 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav5d-4Q5R1F6 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav5d-4Q5R1F6 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav5d-4Q5R1F6 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav5d-4Q5R1F6 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav5d-4Q5R1F6 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav5d-4Q5R1F6 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav5d-4Q5R1F6 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav5d-4Q5R1F6 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav5d-4Q5R1F6 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav5d-4Q5R1F6 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav5d-4Q5R1F6 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav5d-4Q5R1F6 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Trav5d-4Q5R1F6 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav5d-4Q5R1F6 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav5d-4Q5R1F6 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav5d-4Q5R1F6 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav5d-4Q5R1F6 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav5d-4Q5R1F6 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav5d-4Q5R1F6 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav5d-4Q5R1F6 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trav5d-4Q5R1F6 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav5d-4Q5R1F6 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav5d-4Q5R1F6 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav5d-4Q5R1F6 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav5d-4Q5R1F6 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav5d-4Q5R1F6 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Trav5d-4Q5R1F6 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Trav5d-4Q5R1F6 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Trav5d-4Q5R1F6 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav5d-4Q5R1F6 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav5d-4Q5R1F6 Olfr286-202ENSMUST00000205305 969 ntBASIC12.44□□□□□ -0.42
Trav5d-4Q5R1F6 Gm44771-201ENSMUST00000206975 626 ntBASIC12.44□□□□□ -0.42
Trav5d-4Q5R1F6 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav5d-4Q5R1F6 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav5d-4Q5R1F6 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav5d-4Q5R1F6 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav5d-4Q5R1F6 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav5d-4Q5R1F6 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav5d-4Q5R1F6 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav5d-4Q5R1F6 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav5d-4Q5R1F6 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav5d-4Q5R1F6 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav5d-4Q5R1F6 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav5d-4Q5R1F6 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav5d-4Q5R1F6 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav5d-4Q5R1F6 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav5d-4Q5R1F6 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Trav5d-4Q5R1F6 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav5d-4Q5R1F6 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav5d-4Q5R1F6 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav5d-4Q5R1F6 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav5d-4Q5R1F6 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trav5d-4Q5R1F6 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav5d-4Q5R1F6 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
Trav5d-4Q5R1F6 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav5d-4Q5R1F6 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.43□□□□□ -0.42
Trav5d-4Q5R1F6 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trav5d-4Q5R1F6 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.43□□□□□ -0.42
Trav5d-4Q5R1F6 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav5d-4Q5R1F6 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav5d-4Q5R1F6 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav5d-4Q5R1F6 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav5d-4Q5R1F6 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav5d-4Q5R1F6 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trav5d-4Q5R1F6 Mir3113-201ENSMUST00000175478 76 ntBASIC12.43□□□□□ -0.42
Trav5d-4Q5R1F6 Mir8117-201ENSMUST00000184773 107 ntBASIC12.43□□□□□ -0.42
Trav5d-4Q5R1F6 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trav5d-4Q5R1F6 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.43□□□□□ -0.42
Trav5d-4Q5R1F6 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav5d-4Q5R1F6 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav5d-4Q5R1F6 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav5d-4Q5R1F6 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav5d-4Q5R1F6 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav5d-4Q5R1F6 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav5d-4Q5R1F6 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav5d-4Q5R1F6 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav5d-4Q5R1F6 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav5d-4Q5R1F6 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav5d-4Q5R1F6 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav5d-4Q5R1F6 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav5d-4Q5R1F6 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.43□□□□□ -0.42
Trav5d-4Q5R1F6 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav5d-4Q5R1F6 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav5d-4Q5R1F6 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav5d-4Q5R1F6 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav5d-4Q5R1F6 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav5d-4Q5R1F6 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav5d-4Q5R1F6 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav5d-4Q5R1F6 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav5d-4Q5R1F6 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav5d-4Q5R1F6 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav5d-4Q5R1F6 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav5d-4Q5R1F6 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav5d-4Q5R1F6 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav5d-4Q5R1F6 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms