Protein–RNA interactions for Protein: Q3ZN08

Fam220a, Protein FAM220A, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam220aQ3ZN08 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fam220aQ3ZN08 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Fam220aQ3ZN08 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Fam220aQ3ZN08 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Fam220aQ3ZN08 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fam220aQ3ZN08 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fam220aQ3ZN08 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.23□□□□□ -0.45
Fam220aQ3ZN08 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fam220aQ3ZN08 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fam220aQ3ZN08 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Fam220aQ3ZN08 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Fam220aQ3ZN08 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.23□□□□□ -0.45
Fam220aQ3ZN08 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fam220aQ3ZN08 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Fam220aQ3ZN08 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fam220aQ3ZN08 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fam220aQ3ZN08 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Fam220aQ3ZN08 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Fam220aQ3ZN08 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Fam220aQ3ZN08 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fam220aQ3ZN08 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fam220aQ3ZN08 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.23□□□□□ -0.45
Fam220aQ3ZN08 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Fam220aQ3ZN08 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Fam220aQ3ZN08 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Fam220aQ3ZN08 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.23□□□□□ -0.45
Fam220aQ3ZN08 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Fam220aQ3ZN08 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.23□□□□□ -0.45
Fam220aQ3ZN08 Gm15173-201ENSMUST00000122049 433 ntBASIC12.23□□□□□ -0.45
Fam220aQ3ZN08 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fam220aQ3ZN08 Gm18195-201ENSMUST00000207604 706 ntBASIC12.23□□□□□ -0.45
Fam220aQ3ZN08 Gm10060-201ENSMUST00000212002 111 ntBASIC12.23□□□□□ -0.45
Fam220aQ3ZN08 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fam220aQ3ZN08 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fam220aQ3ZN08 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Fam220aQ3ZN08 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fam220aQ3ZN08 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fam220aQ3ZN08 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fam220aQ3ZN08 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fam220aQ3ZN08 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Fam220aQ3ZN08 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Fam220aQ3ZN08 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Fam220aQ3ZN08 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fam220aQ3ZN08 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fam220aQ3ZN08 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fam220aQ3ZN08 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Fam220aQ3ZN08 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.23□□□□□ -0.45
Fam220aQ3ZN08 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fam220aQ3ZN08 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fam220aQ3ZN08 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fam220aQ3ZN08 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fam220aQ3ZN08 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fam220aQ3ZN08 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fam220aQ3ZN08 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Fam220aQ3ZN08 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fam220aQ3ZN08 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fam220aQ3ZN08 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fam220aQ3ZN08 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Fam220aQ3ZN08 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.22□□□□□ -0.45
Fam220aQ3ZN08 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fam220aQ3ZN08 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Fam220aQ3ZN08 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Fam220aQ3ZN08 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fam220aQ3ZN08 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fam220aQ3ZN08 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.22□□□□□ -0.45
Fam220aQ3ZN08 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Fam220aQ3ZN08 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Fam220aQ3ZN08 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fam220aQ3ZN08 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Fam220aQ3ZN08 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fam220aQ3ZN08 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fam220aQ3ZN08 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Fam220aQ3ZN08 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Fam220aQ3ZN08 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC12.22□□□□□ -0.45
Fam220aQ3ZN08 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Fam220aQ3ZN08 Gm28659-201ENSMUST00000188013 759 ntBASIC12.22□□□□□ -0.45
Fam220aQ3ZN08 Gm17971-201ENSMUST00000190239 806 ntBASIC12.22□□□□□ -0.45
Fam220aQ3ZN08 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC12.22□□□□□ -0.45
Fam220aQ3ZN08 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Fam220aQ3ZN08 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fam220aQ3ZN08 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fam220aQ3ZN08 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fam220aQ3ZN08 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Fam220aQ3ZN08 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.22□□□□□ -0.45
Fam220aQ3ZN08 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fam220aQ3ZN08 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.22□□□□□ -0.45
Fam220aQ3ZN08 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fam220aQ3ZN08 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fam220aQ3ZN08 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fam220aQ3ZN08 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Fam220aQ3ZN08 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fam220aQ3ZN08 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fam220aQ3ZN08 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fam220aQ3ZN08 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.21□□□□□ -0.45
Fam220aQ3ZN08 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Fam220aQ3ZN08 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Fam220aQ3ZN08 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Fam220aQ3ZN08 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Fam220aQ3ZN08 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Fam220aQ3ZN08 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms