Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim40Q3UWA4 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim40Q3UWA4 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trim40Q3UWA4 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.58□□□□□ -0.24
Trim40Q3UWA4 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim40Q3UWA4 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim40Q3UWA4 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim40Q3UWA4 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim40Q3UWA4 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim40Q3UWA4 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim40Q3UWA4 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim40Q3UWA4 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim40Q3UWA4 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim40Q3UWA4 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.57□□□□□ -0.24
Trim40Q3UWA4 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim40Q3UWA4 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim40Q3UWA4 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.57□□□□□ -0.24
Trim40Q3UWA4 Gm27357-201ENSMUST00000183754 135 ntBASIC13.57□□□□□ -0.24
Trim40Q3UWA4 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.57□□□□□ -0.24
Trim40Q3UWA4 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim40Q3UWA4 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim40Q3UWA4 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC13.57□□□□□ -0.24
Trim40Q3UWA4 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim40Q3UWA4 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim40Q3UWA4 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.57□□□□□ -0.24
Trim40Q3UWA4 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim40Q3UWA4 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim40Q3UWA4 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.57□□□□□ -0.24
Trim40Q3UWA4 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim40Q3UWA4 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Trim40Q3UWA4 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim40Q3UWA4 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.57□□□□□ -0.24
Trim40Q3UWA4 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim40Q3UWA4 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim40Q3UWA4 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim40Q3UWA4 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim40Q3UWA4 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim40Q3UWA4 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.56□□□□□ -0.24
Trim40Q3UWA4 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Trim40Q3UWA4 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim40Q3UWA4 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim40Q3UWA4 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim40Q3UWA4 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim40Q3UWA4 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.56□□□□□ -0.24
Trim40Q3UWA4 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim40Q3UWA4 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim40Q3UWA4 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trim40Q3UWA4 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim40Q3UWA4 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trim40Q3UWA4 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim40Q3UWA4 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trim40Q3UWA4 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.56□□□□□ -0.24
Trim40Q3UWA4 Gm12895-201ENSMUST00000122214 226 ntBASIC13.56□□□□□ -0.24
Trim40Q3UWA4 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.56□□□□□ -0.24
Trim40Q3UWA4 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim40Q3UWA4 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.56□□□□□ -0.24
Trim40Q3UWA4 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim40Q3UWA4 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Trim40Q3UWA4 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim40Q3UWA4 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.56□□□□□ -0.24
Trim40Q3UWA4 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.56□□□□□ -0.24
Trim40Q3UWA4 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim40Q3UWA4 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim40Q3UWA4 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim40Q3UWA4 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.56□□□□□ -0.24
Trim40Q3UWA4 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.56□□□□□ -0.24
Trim40Q3UWA4 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trim40Q3UWA4 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim40Q3UWA4 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.56□□□□□ -0.24
Trim40Q3UWA4 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim40Q3UWA4 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim40Q3UWA4 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim40Q3UWA4 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim40Q3UWA4 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim40Q3UWA4 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim40Q3UWA4 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim40Q3UWA4 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Trim40Q3UWA4 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim40Q3UWA4 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim40Q3UWA4 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim40Q3UWA4 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim40Q3UWA4 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim40Q3UWA4 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim40Q3UWA4 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim40Q3UWA4 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim40Q3UWA4 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.55□□□□□ -0.24
Trim40Q3UWA4 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim40Q3UWA4 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim40Q3UWA4 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim40Q3UWA4 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim40Q3UWA4 Gm8097-201ENSMUST00000117903 829 ntBASIC13.55□□□□□ -0.24
Trim40Q3UWA4 Gm12644-201ENSMUST00000119935 606 ntBASIC13.55□□□□□ -0.24
Trim40Q3UWA4 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.55□□□□□ -0.24
Trim40Q3UWA4 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.55□□□□□ -0.24
Trim40Q3UWA4 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim40Q3UWA4 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim40Q3UWA4 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim40Q3UWA4 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Trim40Q3UWA4 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim40Q3UWA4 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms