Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf223Q3UV31 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Rnf223Q3UV31 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf223Q3UV31 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.02□□□□□ -0.17
Rnf223Q3UV31 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf223Q3UV31 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf223Q3UV31 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Rnf223Q3UV31 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Rnf223Q3UV31 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Rnf223Q3UV31 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf223Q3UV31 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf223Q3UV31 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf223Q3UV31 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf223Q3UV31 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf223Q3UV31 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf223Q3UV31 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf223Q3UV31 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf223Q3UV31 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf223Q3UV31 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf223Q3UV31 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf223Q3UV31 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rnf223Q3UV31 Gm12106-201ENSMUST00000116006 1200 ntBASIC14.01□□□□□ -0.17
Rnf223Q3UV31 Gm4875-201ENSMUST00000118257 786 ntBASIC14.01□□□□□ -0.17
Rnf223Q3UV31 Gm14716-201ENSMUST00000120138 718 ntBASIC14.01□□□□□ -0.17
Rnf223Q3UV31 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf223Q3UV31 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf223Q3UV31 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf223Q3UV31 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf223Q3UV31 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf223Q3UV31 AC153961.1-201ENSMUST00000217760 385 ntBASIC14.01□□□□□ -0.17
Rnf223Q3UV31 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rnf223Q3UV31 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf223Q3UV31 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf223Q3UV31 Gm2423-201ENSMUST00000074863 733 ntBASIC14.01□□□□□ -0.17
Rnf223Q3UV31 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf223Q3UV31 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf223Q3UV31 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf223Q3UV31 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf223Q3UV31 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf223Q3UV31 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf223Q3UV31 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf223Q3UV31 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf223Q3UV31 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf223Q3UV31 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf223Q3UV31 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14□□□□□ -0.17
Rnf223Q3UV31 Gm5763-201ENSMUST00000155951 1530 ntBASIC14□□□□□ -0.17
Rnf223Q3UV31 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf223Q3UV31 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf223Q3UV31 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf223Q3UV31 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf223Q3UV31 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14□□□□□ -0.17
Rnf223Q3UV31 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rnf223Q3UV31 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rnf223Q3UV31 Gm27838-201ENSMUST00000184829 128 ntBASIC14□□□□□ -0.17
Rnf223Q3UV31 AC121804.3-201ENSMUST00000223420 295 ntBASIC14□□□□□ -0.17
Rnf223Q3UV31 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf223Q3UV31 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf223Q3UV31 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
Rnf223Q3UV31 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rnf223Q3UV31 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf223Q3UV31 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf223Q3UV31 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14□□□□□ -0.17
Rnf223Q3UV31 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Rnf223Q3UV31 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf223Q3UV31 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf223Q3UV31 Gm14451-201ENSMUST00000121581 1542 ntBASIC14□□□□□ -0.17
Rnf223Q3UV31 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf223Q3UV31 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf223Q3UV31 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf223Q3UV31 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf223Q3UV31 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Rnf223Q3UV31 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.99□□□□□ -0.17
Rnf223Q3UV31 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.99□□□□□ -0.17
Rnf223Q3UV31 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf223Q3UV31 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.99□□□□□ -0.17
Rnf223Q3UV31 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.99□□□□□ -0.17
Rnf223Q3UV31 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf223Q3UV31 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf223Q3UV31 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf223Q3UV31 Syt7-204ENSMUST00000223586 1344 ntBASIC13.99□□□□□ -0.17
Rnf223Q3UV31 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf223Q3UV31 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.99□□□□□ -0.17
Rnf223Q3UV31 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf223Q3UV31 Gm16215-201ENSMUST00000161990 637 ntBASIC13.99□□□□□ -0.17
Rnf223Q3UV31 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf223Q3UV31 Gm3436-201ENSMUST00000179930 840 ntBASIC13.99□□□□□ -0.17
Rnf223Q3UV31 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.99□□□□□ -0.17
Rnf223Q3UV31 Gm9229-201ENSMUST00000222777 126 ntBASIC13.99□□□□□ -0.17
Rnf223Q3UV31 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.99□□□□□ -0.17
Rnf223Q3UV31 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf223Q3UV31 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf223Q3UV31 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.99□□□□□ -0.17
Rnf223Q3UV31 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf223Q3UV31 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf223Q3UV31 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf223Q3UV31 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf223Q3UV31 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf223Q3UV31 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf223Q3UV31 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
Rnf223Q3UV31 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms