Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Q3KNL4 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Q3KNL4 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Q3KNL4 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Q3KNL4 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Q3KNL4 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Q3KNL4 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Q3KNL4 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Q3KNL4 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.22□□□□□ -0.13
Q3KNL4 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Q3KNL4 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.22□□□□□ -0.13
Q3KNL4 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Q3KNL4 Gm27300-201ENSMUST00000184085 97 ntBASIC14.22□□□□□ -0.13
Q3KNL4 Gm27335-201ENSMUST00000184758 97 ntBASIC14.22□□□□□ -0.13
Q3KNL4 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Q3KNL4 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Q3KNL4 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Q3KNL4 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Q3KNL4 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Q3KNL4 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Q3KNL4 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Q3KNL4 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.22□□□□□ -0.13
Q3KNL4 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Q3KNL4 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Q3KNL4 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.22□□□□□ -0.13
Q3KNL4 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Q3KNL4 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Q3KNL4 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Q3KNL4 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Q3KNL4 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Q3KNL4 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Q3KNL4 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.22□□□□□ -0.13
Q3KNL4 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Q3KNL4 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Q3KNL4 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.21□□□□□ -0.13
Q3KNL4 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Q3KNL4 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Q3KNL4 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.21□□□□□ -0.13
Q3KNL4 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Q3KNL4 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Q3KNL4 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Q3KNL4 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Q3KNL4 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Q3KNL4 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Q3KNL4 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Q3KNL4 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Q3KNL4 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.21□□□□□ -0.13
Q3KNL4 Gm13464-201ENSMUST00000119418 935 ntBASIC14.21□□□□□ -0.13
Q3KNL4 Gm27628-201ENSMUST00000184911 107 ntBASIC14.21□□□□□ -0.13
Q3KNL4 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Q3KNL4 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Q3KNL4 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.21□□□□□ -0.13
Q3KNL4 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.21□□□□□ -0.13
Q3KNL4 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Q3KNL4 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Q3KNL4 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Q3KNL4 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Q3KNL4 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Q3KNL4 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Q3KNL4 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Q3KNL4 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Q3KNL4 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Q3KNL4 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Q3KNL4 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Q3KNL4 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Q3KNL4 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Q3KNL4 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q3KNL4 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.2□□□□□ -0.14
Q3KNL4 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q3KNL4 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q3KNL4 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q3KNL4 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q3KNL4 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q3KNL4 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.2□□□□□ -0.14
Q3KNL4 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Q3KNL4 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q3KNL4 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
Q3KNL4 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Q3KNL4 Mir5126-201ENSMUST00000175513 77 ntBASIC14.2□□□□□ -0.14
Q3KNL4 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.2□□□□□ -0.14
Q3KNL4 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q3KNL4 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.2□□□□□ -0.14
Q3KNL4 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q3KNL4 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q3KNL4 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.2□□□□□ -0.14
Q3KNL4 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Q3KNL4 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.2□□□□□ -0.14
Q3KNL4 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Q3KNL4 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Q3KNL4 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q3KNL4 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q3KNL4 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q3KNL4 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q3KNL4 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Q3KNL4 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q3KNL4 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.19□□□□□ -0.14
Q3KNL4 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Q3KNL4 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q3KNL4 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q3KNL4 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms