Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chrna5Q2MKA5 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chrna5Q2MKA5 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chrna5Q2MKA5 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chrna5Q2MKA5 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chrna5Q2MKA5 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
Chrna5Q2MKA5 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chrna5Q2MKA5 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
Chrna5Q2MKA5 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.08■□□□□ 0.32
Chrna5Q2MKA5 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chrna5Q2MKA5 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Chrna5Q2MKA5 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chrna5Q2MKA5 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chrna5Q2MKA5 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chrna5Q2MKA5 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.07■□□□□ 0.32
Chrna5Q2MKA5 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC17.07■□□□□ 0.32
Chrna5Q2MKA5 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Chrna5Q2MKA5 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.07■□□□□ 0.32
Chrna5Q2MKA5 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Chrna5Q2MKA5 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chrna5Q2MKA5 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC17.07■□□□□ 0.32
Chrna5Q2MKA5 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chrna5Q2MKA5 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chrna5Q2MKA5 Gm14660-201ENSMUST00000119809 575 ntBASIC17.07■□□□□ 0.32
Chrna5Q2MKA5 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chrna5Q2MKA5 Gm45784-201ENSMUST00000188360 142 ntBASIC17.07■□□□□ 0.32
Chrna5Q2MKA5 Gm37424-201ENSMUST00000191727 561 ntBASIC17.07■□□□□ 0.32
Chrna5Q2MKA5 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Chrna5Q2MKA5 Gm7561-201ENSMUST00000211203 886 ntBASIC17.07■□□□□ 0.32
Chrna5Q2MKA5 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chrna5Q2MKA5 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chrna5Q2MKA5 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chrna5Q2MKA5 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chrna5Q2MKA5 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chrna5Q2MKA5 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chrna5Q2MKA5 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chrna5Q2MKA5 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chrna5Q2MKA5 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chrna5Q2MKA5 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chrna5Q2MKA5 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chrna5Q2MKA5 Gm38037-201ENSMUST00000192600 1624 ntBASIC17.07■□□□□ 0.32
Chrna5Q2MKA5 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chrna5Q2MKA5 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chrna5Q2MKA5 Zscan30-202ENSMUST00000224144 1458 ntBASIC17.06■□□□□ 0.32
Chrna5Q2MKA5 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chrna5Q2MKA5 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chrna5Q2MKA5 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Chrna5Q2MKA5 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Chrna5Q2MKA5 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chrna5Q2MKA5 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chrna5Q2MKA5 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Chrna5Q2MKA5 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chrna5Q2MKA5 Gm27486-201ENSMUST00000184923 80 ntBASIC17.06■□□□□ 0.32
Chrna5Q2MKA5 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chrna5Q2MKA5 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chrna5Q2MKA5 Gm10478-201ENSMUST00000084451 396 ntBASIC17.06■□□□□ 0.32
Chrna5Q2MKA5 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chrna5Q2MKA5 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chrna5Q2MKA5 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.06■□□□□ 0.32
Chrna5Q2MKA5 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Chrna5Q2MKA5 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Chrna5Q2MKA5 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Chrna5Q2MKA5 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Chrna5Q2MKA5 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Chrna5Q2MKA5 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Chrna5Q2MKA5 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Chrna5Q2MKA5 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chrna5Q2MKA5 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chrna5Q2MKA5 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chrna5Q2MKA5 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Chrna5Q2MKA5 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chrna5Q2MKA5 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chrna5Q2MKA5 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chrna5Q2MKA5 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.05■□□□□ 0.32
Chrna5Q2MKA5 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chrna5Q2MKA5 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Chrna5Q2MKA5 Gm15376-201ENSMUST00000122258 783 ntBASIC17.05■□□□□ 0.32
Chrna5Q2MKA5 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC17.05■□□□□ 0.32
Chrna5Q2MKA5 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC17.05■□□□□ 0.32
Chrna5Q2MKA5 Gm15429-201ENSMUST00000151268 798 ntBASIC17.05■□□□□ 0.32
Chrna5Q2MKA5 Gm43094-201ENSMUST00000196549 921 ntBASIC17.05■□□□□ 0.32
Chrna5Q2MKA5 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chrna5Q2MKA5 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Chrna5Q2MKA5 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chrna5Q2MKA5 AC155729.1-201ENSMUST00000227758 544 ntBASIC17.05■□□□□ 0.32
Chrna5Q2MKA5 Gm6091-201ENSMUST00000098307 165 ntBASIC17.05■□□□□ 0.32
Chrna5Q2MKA5 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Chrna5Q2MKA5 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Chrna5Q2MKA5 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Chrna5Q2MKA5 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Chrna5Q2MKA5 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chrna5Q2MKA5 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chrna5Q2MKA5 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Chrna5Q2MKA5 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chrna5Q2MKA5 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chrna5Q2MKA5 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Chrna5Q2MKA5 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chrna5Q2MKA5 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Chrna5Q2MKA5 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chrna5Q2MKA5 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms