Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd8Q09XV5 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC12.8□□□□□ -0.36
Chd8Q09XV5 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.8□□□□□ -0.36
Chd8Q09XV5 Gm25261-201ENSMUST00000157416 134 ntBASIC12.8□□□□□ -0.36
Chd8Q09XV5 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd8Q09XV5 Gm25517-201ENSMUST00000083865 134 ntBASIC12.8□□□□□ -0.36
Chd8Q09XV5 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd8Q09XV5 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Chd8Q09XV5 Rarb-207ENSMUST00000225921 2756 ntBASIC12.8□□□□□ -0.36
Chd8Q09XV5 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd8Q09XV5 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd8Q09XV5 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd8Q09XV5 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Chd8Q09XV5 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd8Q09XV5 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd8Q09XV5 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC12.8□□□□□ -0.36
Chd8Q09XV5 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd8Q09XV5 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd8Q09XV5 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.8□□□□□ -0.36
Chd8Q09XV5 Gm12203-201ENSMUST00000118235 598 ntBASIC12.8□□□□□ -0.36
Chd8Q09XV5 Gm12209-201ENSMUST00000120089 596 ntBASIC12.8□□□□□ -0.36
Chd8Q09XV5 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.8□□□□□ -0.36
Chd8Q09XV5 Gm25927-201ENSMUST00000175058 117 ntBASIC12.8□□□□□ -0.36
Chd8Q09XV5 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chd8Q09XV5 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chd8Q09XV5 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.8□□□□□ -0.36
Chd8Q09XV5 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.8□□□□□ -0.36
Chd8Q09XV5 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd8Q09XV5 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chd8Q09XV5 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd8Q09XV5 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd8Q09XV5 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chd8Q09XV5 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.79□□□□□ -0.36
Chd8Q09XV5 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd8Q09XV5 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chd8Q09XV5 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Chd8Q09XV5 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chd8Q09XV5 Gm43094-201ENSMUST00000196549 921 ntBASIC12.79□□□□□ -0.36
Chd8Q09XV5 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd8Q09XV5 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd8Q09XV5 Gm5112-201ENSMUST00000204407 2368 ntBASIC12.79□□□□□ -0.36
Chd8Q09XV5 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd8Q09XV5 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Chd8Q09XV5 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd8Q09XV5 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.79□□□□□ -0.36
Chd8Q09XV5 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Chd8Q09XV5 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Chd8Q09XV5 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd8Q09XV5 Mir686-201ENSMUST00000102174 109 ntBASIC12.79□□□□□ -0.36
Chd8Q09XV5 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd8Q09XV5 Gm13611-201ENSMUST00000118269 318 ntBASIC12.79□□□□□ -0.36
Chd8Q09XV5 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Chd8Q09XV5 Gm4271-201ENSMUST00000174444 973 ntBASIC12.79□□□□□ -0.36
Chd8Q09XV5 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd8Q09XV5 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd8Q09XV5 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Chd8Q09XV5 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Chd8Q09XV5 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd8Q09XV5 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd8Q09XV5 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd8Q09XV5 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd8Q09XV5 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd8Q09XV5 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd8Q09XV5 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd8Q09XV5 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd8Q09XV5 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd8Q09XV5 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Chd8Q09XV5 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.78□□□□□ -0.36
Chd8Q09XV5 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Chd8Q09XV5 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.78□□□□□ -0.36
Chd8Q09XV5 Gm13097-201ENSMUST00000210722 397 ntBASIC12.78□□□□□ -0.36
Chd8Q09XV5 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.78□□□□□ -0.36
Chd8Q09XV5 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd8Q09XV5 Gm44999-201ENSMUST00000207456 1493 ntBASIC12.78□□□□□ -0.36
Chd8Q09XV5 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd8Q09XV5 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd8Q09XV5 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd8Q09XV5 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Chd8Q09XV5 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Chd8Q09XV5 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.78□□□□□ -0.36
Chd8Q09XV5 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC12.78□□□□□ -0.36
Chd8Q09XV5 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Chd8Q09XV5 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd8Q09XV5 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd8Q09XV5 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Chd8Q09XV5 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd8Q09XV5 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.78□□□□□ -0.36
Chd8Q09XV5 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd8Q09XV5 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.78□□□□□ -0.36
Chd8Q09XV5 Gm23218-201ENSMUST00000158124 276 ntBASIC12.78□□□□□ -0.36
Chd8Q09XV5 Mir3060-201ENSMUST00000175339 83 ntBASIC12.78□□□□□ -0.36
Chd8Q09XV5 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd8Q09XV5 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd8Q09XV5 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd8Q09XV5 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Chd8Q09XV5 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd8Q09XV5 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.78□□□□□ -0.36
Chd8Q09XV5 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd8Q09XV5 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd8Q09XV5 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms