Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx3-2P97503 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.68□□□□□ -0.22
Nkx3-2P97503 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx3-2P97503 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx3-2P97503 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Nkx3-2P97503 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx3-2P97503 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx3-2P97503 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx3-2P97503 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx3-2P97503 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Nkx3-2P97503 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx3-2P97503 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx3-2P97503 Gm14057-201ENSMUST00000120631 482 ntBASIC13.68□□□□□ -0.22
Nkx3-2P97503 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.68□□□□□ -0.22
Nkx3-2P97503 Gm25144-201ENSMUST00000179561 110 ntBASIC13.68□□□□□ -0.22
Nkx3-2P97503 Gm25352-201ENSMUST00000179815 110 ntBASIC13.68□□□□□ -0.22
Nkx3-2P97503 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.68□□□□□ -0.22
Nkx3-2P97503 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.68□□□□□ -0.22
Nkx3-2P97503 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.68□□□□□ -0.22
Nkx3-2P97503 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.68□□□□□ -0.22
Nkx3-2P97503 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx3-2P97503 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx3-2P97503 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx3-2P97503 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx3-2P97503 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx3-2P97503 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx3-2P97503 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx3-2P97503 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx3-2P97503 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx3-2P97503 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.68□□□□□ -0.22
Nkx3-2P97503 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Nkx3-2P97503 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.68□□□□□ -0.22
Nkx3-2P97503 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Nkx3-2P97503 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
Nkx3-2P97503 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx3-2P97503 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx3-2P97503 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Nkx3-2P97503 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.67□□□□□ -0.22
Nkx3-2P97503 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx3-2P97503 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Nkx3-2P97503 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx3-2P97503 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx3-2P97503 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx3-2P97503 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx3-2P97503 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx3-2P97503 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx3-2P97503 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx3-2P97503 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx3-2P97503 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx3-2P97503 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx3-2P97503 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Nkx3-2P97503 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Nkx3-2P97503 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.67□□□□□ -0.22
Nkx3-2P97503 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx3-2P97503 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx3-2P97503 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx3-2P97503 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Nkx3-2P97503 Gm29541-201ENSMUST00000191351 678 ntBASIC13.67□□□□□ -0.22
Nkx3-2P97503 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx3-2P97503 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx3-2P97503 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx3-2P97503 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx3-2P97503 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx3-2P97503 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx3-2P97503 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx3-2P97503 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Nkx3-2P97503 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx3-2P97503 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx3-2P97503 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx3-2P97503 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx3-2P97503 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx3-2P97503 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx3-2P97503 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Nkx3-2P97503 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx3-2P97503 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx3-2P97503 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx3-2P97503 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.66□□□□□ -0.22
Nkx3-2P97503 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx3-2P97503 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.66□□□□□ -0.22
Nkx3-2P97503 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx3-2P97503 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx3-2P97503 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.66□□□□□ -0.22
Nkx3-2P97503 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Nkx3-2P97503 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx3-2P97503 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx3-2P97503 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.66□□□□□ -0.22
Nkx3-2P97503 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx3-2P97503 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx3-2P97503 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx3-2P97503 Gm6415-201ENSMUST00000118488 348 ntBASIC13.66□□□□□ -0.22
Nkx3-2P97503 Gm13015-201ENSMUST00000118674 204 ntBASIC13.66□□□□□ -0.22
Nkx3-2P97503 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx3-2P97503 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.66□□□□□ -0.22
Nkx3-2P97503 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx3-2P97503 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx3-2P97503 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx3-2P97503 Gm27306-201ENSMUST00000183970 107 ntBASIC13.66□□□□□ -0.22
Nkx3-2P97503 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.66□□□□□ -0.22
Nkx3-2P97503 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.66□□□□□ -0.22
Nkx3-2P97503 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms