Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Gm23689-201ENSMUST00000180354 110 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm27359-201ENSMUST00000184153 110 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm27785-201ENSMUST00000184268 110 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm27466-201ENSMUST00000184396 110 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm27703-201ENSMUST00000184836 110 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm29310-201ENSMUST00000185468 696 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm21825-201ENSMUST00000185728 696 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm29109-201ENSMUST00000185895 696 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm21896-201ENSMUST00000186520 696 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm21873-201ENSMUST00000186728 696 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm21794-201ENSMUST00000187056 696 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm21880-201ENSMUST00000187275 696 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm21826-201ENSMUST00000187451 696 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm21198-201ENSMUST00000188393 696 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm21749-201ENSMUST00000189343 696 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm21901-201ENSMUST00000189568 696 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm29424-201ENSMUST00000189716 696 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm28599-201ENSMUST00000189838 694 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm21867-201ENSMUST00000189917 696 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm29269-201ENSMUST00000190087 696 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm21722-201ENSMUST00000190153 696 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm28423-201ENSMUST00000190701 696 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm21899-201ENSMUST00000190745 696 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm21910-201ENSMUST00000191163 696 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm21849-201ENSMUST00000191571 696 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm28678-201ENSMUST00000191593 696 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm20910-201ENSMUST00000193268 696 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm21871-201ENSMUST00000194621 696 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm2756-201ENSMUST00000195851 400 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Gm43125-201ENSMUST00000201724 730 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.73■□□□□ 0.11
Trim43cP86449 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim43cP86449 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.73■□□□□ 0.11
Trim43cP86449 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.73■□□□□ 0.11
Trim43cP86449 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim43cP86449 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim43cP86449 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.73■□□□□ 0.11
Trim43cP86449 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim43cP86449 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim43cP86449 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim43cP86449 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Trim43cP86449 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim43cP86449 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim43cP86449 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.72■□□□□ 0.11
Trim43cP86449 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim43cP86449 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim43cP86449 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim43cP86449 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim43cP86449 Gm6159-201ENSMUST00000191249 1724 ntBASIC15.72■□□□□ 0.11
Trim43cP86449 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Trim43cP86449 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.72■□□□□ 0.11
Trim43cP86449 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.72■□□□□ 0.11
Trim43cP86449 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.72■□□□□ 0.11
Trim43cP86449 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim43cP86449 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim43cP86449 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim43cP86449 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim43cP86449 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC15.72■□□□□ 0.11
Trim43cP86449 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim43cP86449 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trim43cP86449 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim43cP86449 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim43cP86449 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim43cP86449 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Trim43cP86449 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim43cP86449 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim43cP86449 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trim43cP86449 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Trim43cP86449 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trim43cP86449 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim43cP86449 Gm27702-201ENSMUST00000184512 56 ntBASIC15.71■□□□□ 0.11
Trim43cP86449 Gm37935-201ENSMUST00000192012 982 ntBASIC15.71■□□□□ 0.11
Trim43cP86449 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trim43cP86449 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trim43cP86449 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trim43cP86449 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim43cP86449 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim43cP86449 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim43cP86449 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Trim43cP86449 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC15.71■□□□□ 0.1
Trim43cP86449 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trim43cP86449 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trim43cP86449 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trim43cP86449 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
Trim43cP86449 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trim43cP86449 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Trim43cP86449 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim43cP86449 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim43cP86449 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim43cP86449 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim43cP86449 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim43cP86449 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim43cP86449 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.7■□□□□ 0.1
Trim43cP86449 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim43cP86449 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim43cP86449 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim43cP86449 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trim43cP86449 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC15.7■□□□□ 0.1
Trim43cP86449 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim43cP86449 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms