Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43bP86448 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.89□□□□□ -0.03
Trim43bP86448 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43bP86448 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trim43bP86448 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Trim43bP86448 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43bP86448 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.89□□□□□ -0.03
Trim43bP86448 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43bP86448 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43bP86448 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Trim43bP86448 Gm11594-201ENSMUST00000122313 162 ntBASIC14.89□□□□□ -0.03
Trim43bP86448 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.89□□□□□ -0.03
Trim43bP86448 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.89□□□□□ -0.03
Trim43bP86448 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43bP86448 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trim43bP86448 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.89□□□□□ -0.03
Trim43bP86448 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43bP86448 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43bP86448 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43bP86448 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.89□□□□□ -0.03
Trim43bP86448 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43bP86448 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43bP86448 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43bP86448 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43bP86448 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trim43bP86448 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43bP86448 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.89□□□□□ -0.03
Trim43bP86448 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trim43bP86448 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43bP86448 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trim43bP86448 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43bP86448 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43bP86448 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43bP86448 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.88□□□□□ -0.03
Trim43bP86448 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43bP86448 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43bP86448 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43bP86448 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43bP86448 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43bP86448 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43bP86448 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43bP86448 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trim43bP86448 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Trim43bP86448 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43bP86448 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43bP86448 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.88□□□□□ -0.03
Trim43bP86448 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43bP86448 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Trim43bP86448 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43bP86448 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43bP86448 Gm24513-201ENSMUST00000174964 138 ntBASIC14.88□□□□□ -0.03
Trim43bP86448 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43bP86448 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43bP86448 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Trim43bP86448 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43bP86448 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trim43bP86448 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43bP86448 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43bP86448 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.88□□□□□ -0.03
Trim43bP86448 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43bP86448 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43bP86448 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43bP86448 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.88□□□□□ -0.03
Trim43bP86448 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trim43bP86448 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trim43bP86448 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.88□□□□□ -0.03
Trim43bP86448 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trim43bP86448 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43bP86448 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43bP86448 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trim43bP86448 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43bP86448 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43bP86448 Rubie-203ENSMUST00000227803 2430 ntBASIC14.87□□□□□ -0.03
Trim43bP86448 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43bP86448 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43bP86448 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43bP86448 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.87□□□□□ -0.03
Trim43bP86448 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.87□□□□□ -0.03
Trim43bP86448 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43bP86448 Gm27397-201ENSMUST00000184997 107 ntBASIC14.87□□□□□ -0.03
Trim43bP86448 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43bP86448 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43bP86448 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43bP86448 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43bP86448 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43bP86448 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43bP86448 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trim43bP86448 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43bP86448 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43bP86448 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43bP86448 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43bP86448 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trim43bP86448 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43bP86448 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43bP86448 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43bP86448 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trim43bP86448 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.87□□□□□ -0.03
Trim43bP86448 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43bP86448 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43bP86448 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms