Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.88□□□□□ -0.35
H3f3aP84244 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.88□□□□□ -0.35
H3f3aP84244 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
H3f3aP84244 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
H3f3aP84244 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.88□□□□□ -0.35
H3f3aP84244 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.88□□□□□ -0.35
H3f3aP84244 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H3f3aP84244 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H3f3aP84244 Gm10275-201ENSMUST00000092620 635 ntBASIC12.88□□□□□ -0.35
H3f3aP84244 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
H3f3aP84244 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H3f3aP84244 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
H3f3aP84244 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.88□□□□□ -0.35
H3f3aP84244 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H3f3aP84244 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H3f3aP84244 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H3f3aP84244 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
H3f3aP84244 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H3f3aP84244 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H3f3aP84244 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H3f3aP84244 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H3f3aP84244 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H3f3aP84244 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H3f3aP84244 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H3f3aP84244 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H3f3aP84244 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H3f3aP84244 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
H3f3aP84244 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H3f3aP84244 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
H3f3aP84244 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H3f3aP84244 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
H3f3aP84244 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.87□□□□□ -0.35
H3f3aP84244 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
H3f3aP84244 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
H3f3aP84244 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
H3f3aP84244 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H3f3aP84244 Gm13015-201ENSMUST00000118674 204 ntBASIC12.87□□□□□ -0.35
H3f3aP84244 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.87□□□□□ -0.35
H3f3aP84244 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
H3f3aP84244 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.87□□□□□ -0.35
H3f3aP84244 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
H3f3aP84244 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
H3f3aP84244 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
H3f3aP84244 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
H3f3aP84244 Gm18049-201ENSMUST00000208909 581 ntBASIC12.87□□□□□ -0.35
H3f3aP84244 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
H3f3aP84244 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
H3f3aP84244 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
H3f3aP84244 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H3f3aP84244 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H3f3aP84244 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H3f3aP84244 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
H3f3aP84244 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
H3f3aP84244 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H3f3aP84244 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
H3f3aP84244 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
H3f3aP84244 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H3f3aP84244 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
H3f3aP84244 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H3f3aP84244 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H3f3aP84244 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
H3f3aP84244 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H3f3aP84244 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.87□□□□□ -0.35
H3f3aP84244 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
H3f3aP84244 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
H3f3aP84244 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
H3f3aP84244 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H3f3aP84244 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
H3f3aP84244 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.87□□□□□ -0.35
H3f3aP84244 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
H3f3aP84244 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
H3f3aP84244 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H3f3aP84244 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
H3f3aP84244 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H3f3aP84244 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
H3f3aP84244 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H3f3aP84244 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.86□□□□□ -0.35
H3f3aP84244 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
H3f3aP84244 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
H3f3aP84244 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.86□□□□□ -0.35
H3f3aP84244 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H3f3aP84244 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
H3f3aP84244 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H3f3aP84244 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.86□□□□□ -0.35
H3f3aP84244 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.86□□□□□ -0.35
H3f3aP84244 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
H3f3aP84244 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H3f3aP84244 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
H3f3aP84244 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H3f3aP84244 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
H3f3aP84244 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.86□□□□□ -0.35
H3f3aP84244 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.86□□□□□ -0.35
H3f3aP84244 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
H3f3aP84244 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H3f3aP84244 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
H3f3aP84244 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.86□□□□□ -0.35
H3f3aP84244 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H3f3aP84244 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H3f3aP84244 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H3f3aP84244 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms