Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Lhx1P63006 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx1P63006 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx1P63006 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.2□□□□□ -0.14
Lhx1P63006 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx1P63006 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx1P63006 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx1P63006 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx1P63006 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx1P63006 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx1P63006 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lhx1P63006 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lhx1P63006 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lhx1P63006 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lhx1P63006 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lhx1P63006 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lhx1P63006 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Lhx1P63006 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.19□□□□□ -0.14
Lhx1P63006 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.19□□□□□ -0.14
Lhx1P63006 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lhx1P63006 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Lhx1P63006 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Lhx1P63006 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Lhx1P63006 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lhx1P63006 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lhx1P63006 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lhx1P63006 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lhx1P63006 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Lhx1P63006 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lhx1P63006 Mir8102-201ENSMUST00000184148 139 ntBASIC14.19□□□□□ -0.14
Lhx1P63006 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lhx1P63006 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lhx1P63006 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lhx1P63006 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lhx1P63006 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lhx1P63006 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Lhx1P63006 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.19□□□□□ -0.14
Lhx1P63006 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lhx1P63006 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.19□□□□□ -0.14
Lhx1P63006 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lhx1P63006 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lhx1P63006 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lhx1P63006 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lhx1P63006 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lhx1P63006 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lhx1P63006 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx1P63006 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx1P63006 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx1P63006 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.18□□□□□ -0.14
Lhx1P63006 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Lhx1P63006 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Lhx1P63006 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx1P63006 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx1P63006 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Lhx1P63006 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx1P63006 Mir1897-201ENSMUST00000122581 272 ntBASIC14.18□□□□□ -0.14
Lhx1P63006 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx1P63006 Mir7684-201ENSMUST00000183858 60 ntBASIC14.18□□□□□ -0.14
Lhx1P63006 Gm27989-201ENSMUST00000184721 107 ntBASIC14.18□□□□□ -0.14
Lhx1P63006 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx1P63006 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx1P63006 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.18□□□□□ -0.14
Lhx1P63006 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx1P63006 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx1P63006 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx1P63006 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Lhx1P63006 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.18□□□□□ -0.14
Lhx1P63006 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx1P63006 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx1P63006 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx1P63006 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx1P63006 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx1P63006 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx1P63006 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Lhx1P63006 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx1P63006 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Lhx1P63006 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx1P63006 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx1P63006 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx1P63006 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.17□□□□□ -0.14
Lhx1P63006 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.17□□□□□ -0.14
Lhx1P63006 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx1P63006 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx1P63006 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx1P63006 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx1P63006 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Lhx1P63006 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx1P63006 BC001981-202ENSMUST00000191393 1545 ntBASIC14.17□□□□□ -0.14
Lhx1P63006 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx1P63006 Carlr-201ENSMUST00000181515 2574 ntBASIC14.17□□□□□ -0.14
Lhx1P63006 Gm12882-201ENSMUST00000121696 517 ntBASIC14.17□□□□□ -0.14
Lhx1P63006 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.17□□□□□ -0.14
Lhx1P63006 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.17□□□□□ -0.14
Lhx1P63006 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx1P63006 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx1P63006 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Lhx1P63006 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Lhx1P63006 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx1P63006 Gm9063-201ENSMUST00000223299 582 ntBASIC14.17□□□□□ -0.14
Lhx1P63006 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms