Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm3P62311 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm3P62311 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm3P62311 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm3P62311 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.18□□□□□ -0.3
Lsm3P62311 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm3P62311 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.18□□□□□ -0.3
Lsm3P62311 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.18□□□□□ -0.3
Lsm3P62311 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
Lsm3P62311 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Lsm3P62311 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm3P62311 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Lsm3P62311 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm3P62311 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm3P62311 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm3P62311 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm3P62311 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm3P62311 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm3P62311 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm3P62311 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm3P62311 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC13.18□□□□□ -0.3
Lsm3P62311 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm3P62311 Gm10653-202ENSMUST00000139570 835 ntBASIC13.18□□□□□ -0.3
Lsm3P62311 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC13.18□□□□□ -0.3
Lsm3P62311 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC13.18□□□□□ -0.3
Lsm3P62311 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm3P62311 Gm43767-201ENSMUST00000198933 381 ntBASIC13.18□□□□□ -0.3
Lsm3P62311 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm3P62311 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm3P62311 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm3P62311 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm3P62311 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm3P62311 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.18□□□□□ -0.3
Lsm3P62311 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm3P62311 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm3P62311 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.18□□□□□ -0.3
Lsm3P62311 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm3P62311 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm3P62311 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm3P62311 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Lsm3P62311 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm3P62311 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Lsm3P62311 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm3P62311 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm3P62311 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm3P62311 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Lsm3P62311 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.17□□□□□ -0.3
Lsm3P62311 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm3P62311 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.17□□□□□ -0.3
Lsm3P62311 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm3P62311 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
Lsm3P62311 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm3P62311 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm3P62311 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm3P62311 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.17□□□□□ -0.3
Lsm3P62311 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC13.17□□□□□ -0.3
Lsm3P62311 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.17□□□□□ -0.3
Lsm3P62311 AC112142.1-201ENSMUST00000228796 918 ntBASIC13.17□□□□□ -0.3
Lsm3P62311 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm3P62311 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Lsm3P62311 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.17□□□□□ -0.3
Lsm3P62311 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm3P62311 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm3P62311 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm3P62311 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm3P62311 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm3P62311 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm3P62311 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm3P62311 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm3P62311 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.17□□□□□ -0.3
Lsm3P62311 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm3P62311 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm3P62311 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm3P62311 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm3P62311 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Lsm3P62311 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm3P62311 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm3P62311 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm3P62311 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm3P62311 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC13.16□□□□□ -0.3
Lsm3P62311 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Lsm3P62311 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Lsm3P62311 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC13.16□□□□□ -0.3
Lsm3P62311 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm3P62311 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Lsm3P62311 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Lsm3P62311 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
Lsm3P62311 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm3P62311 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm3P62311 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm3P62311 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm3P62311 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.15□□□□□ -0.3
Lsm3P62311 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm3P62311 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm3P62311 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm3P62311 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm3P62311 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm3P62311 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm3P62311 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm3P62311 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms