Protein–RNA interactions for Protein: P55284

Cdh5, Cadherin-5, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh5P55284 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh5P55284 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh5P55284 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh5P55284 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh5P55284 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Cdh5P55284 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh5P55284 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cdh5P55284 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh5P55284 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh5P55284 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh5P55284 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh5P55284 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh5P55284 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.12□□□□□ -0.15
Cdh5P55284 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh5P55284 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh5P55284 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh5P55284 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh5P55284 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh5P55284 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh5P55284 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh5P55284 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh5P55284 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh5P55284 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh5P55284 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cdh5P55284 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh5P55284 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh5P55284 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh5P55284 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh5P55284 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh5P55284 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh5P55284 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh5P55284 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh5P55284 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.11□□□□□ -0.15
Cdh5P55284 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Cdh5P55284 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh5P55284 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh5P55284 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.11□□□□□ -0.15
Cdh5P55284 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.11□□□□□ -0.15
Cdh5P55284 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cdh5P55284 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh5P55284 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh5P55284 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh5P55284 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh5P55284 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh5P55284 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Cdh5P55284 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh5P55284 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh5P55284 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cdh5P55284 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh5P55284 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh5P55284 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cdh5P55284 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cdh5P55284 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh5P55284 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh5P55284 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh5P55284 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Cdh5P55284 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh5P55284 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh5P55284 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh5P55284 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Cdh5P55284 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh5P55284 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh5P55284 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh5P55284 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.1□□□□□ -0.15
Cdh5P55284 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Cdh5P55284 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh5P55284 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh5P55284 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Cdh5P55284 Gm8318-201ENSMUST00000182954 872 ntBASIC14.1□□□□□ -0.15
Cdh5P55284 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.1□□□□□ -0.15
Cdh5P55284 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.1□□□□□ -0.15
Cdh5P55284 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh5P55284 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh5P55284 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh5P55284 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.1□□□□□ -0.15
Cdh5P55284 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh5P55284 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh5P55284 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh5P55284 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh5P55284 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh5P55284 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Cdh5P55284 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh5P55284 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh5P55284 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.1□□□□□ -0.15
Cdh5P55284 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh5P55284 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh5P55284 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cdh5P55284 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh5P55284 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh5P55284 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdh5P55284 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cdh5P55284 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cdh5P55284 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cdh5P55284 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdh5P55284 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdh5P55284 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cdh5P55284 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cdh5P55284 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdh5P55284 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdh5P55284 Gm13597-201ENSMUST00000121239 375 ntBASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms