Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC18.19■□□□□ 0.5
Msh6P54276 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Msh6P54276 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Msh6P54276 Gm15393-201ENSMUST00000120499 219 ntBASIC18.19■□□□□ 0.5
Msh6P54276 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Msh6P54276 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Msh6P54276 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC18.19■□□□□ 0.5
Msh6P54276 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC18.19■□□□□ 0.5
Msh6P54276 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Msh6P54276 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Msh6P54276 AC155252.1-201ENSMUST00000226462 1208 ntBASIC18.19■□□□□ 0.5
Msh6P54276 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Msh6P54276 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Msh6P54276 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Msh6P54276 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Msh6P54276 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC18.19■□□□□ 0.5
Msh6P54276 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Msh6P54276 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Msh6P54276 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Msh6P54276 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Msh6P54276 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Msh6P54276 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Msh6P54276 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Msh6P54276 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Msh6P54276 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Msh6P54276 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Msh6P54276 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Msh6P54276 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Msh6P54276 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Msh6P54276 Gm15460-201ENSMUST00000118147 391 ntBASIC18.18■□□□□ 0.5
Msh6P54276 Gm11425-201ENSMUST00000119608 498 ntBASIC18.18■□□□□ 0.5
Msh6P54276 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Msh6P54276 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Msh6P54276 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC18.18■□□□□ 0.5
Msh6P54276 Mir7654-201ENSMUST00000185082 70 ntBASIC18.18■□□□□ 0.5
Msh6P54276 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC18.18■□□□□ 0.5
Msh6P54276 Gm9396-201ENSMUST00000076703 567 ntBASIC18.18■□□□□ 0.5
Msh6P54276 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Msh6P54276 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
Msh6P54276 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Msh6P54276 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Msh6P54276 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Msh6P54276 Ssr1-204ENSMUST00000225319 1610 ntBASIC18.18■□□□□ 0.5
Msh6P54276 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Msh6P54276 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Msh6P54276 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Msh6P54276 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Msh6P54276 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Msh6P54276 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Msh6P54276 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Msh6P54276 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
Msh6P54276 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Msh6P54276 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Msh6P54276 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Msh6P54276 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC18.18■□□□□ 0.5
Msh6P54276 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Msh6P54276 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Msh6P54276 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC18.17■□□□□ 0.5
Msh6P54276 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Msh6P54276 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Msh6P54276 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Msh6P54276 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Msh6P54276 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Msh6P54276 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Msh6P54276 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Msh6P54276 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Msh6P54276 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Msh6P54276 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Msh6P54276 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Msh6P54276 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Msh6P54276 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Msh6P54276 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Msh6P54276 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Msh6P54276 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Msh6P54276 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Msh6P54276 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Msh6P54276 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Msh6P54276 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Msh6P54276 Gm15957-201ENSMUST00000118893 974 ntBASIC18.17■□□□□ 0.5
Msh6P54276 Mir6420-201ENSMUST00000185032 102 ntBASIC18.17■□□□□ 0.5
Msh6P54276 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC18.17■□□□□ 0.5
Msh6P54276 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Msh6P54276 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Msh6P54276 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC18.17■□□□□ 0.5
Msh6P54276 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Msh6P54276 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.16■□□□□ 0.5
Msh6P54276 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Msh6P54276 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Msh6P54276 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Msh6P54276 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Msh6P54276 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC18.16■□□□□ 0.5
Msh6P54276 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Msh6P54276 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Msh6P54276 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC18.16■□□□□ 0.5
Msh6P54276 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
Msh6P54276 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Msh6P54276 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Msh6P54276 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Msh6P54276 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC18.16■□□□□ 0.5
Msh6P54276 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms