Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Rom1P32958 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Rom1P32958 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC11.43□□□□□ -0.58
Rom1P32958 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rom1P32958 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Rom1P32958 AC151836.1-202ENSMUST00000226259 753 ntBASIC11.43□□□□□ -0.58
Rom1P32958 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rom1P32958 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rom1P32958 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rom1P32958 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rom1P32958 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC11.43□□□□□ -0.58
Rom1P32958 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rom1P32958 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Rom1P32958 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rom1P32958 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rom1P32958 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rom1P32958 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rom1P32958 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rom1P32958 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rom1P32958 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rom1P32958 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rom1P32958 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rom1P32958 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Rom1P32958 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rom1P32958 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rom1P32958 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rom1P32958 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rom1P32958 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Rom1P32958 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC11.42□□□□□ -0.58
Rom1P32958 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rom1P32958 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Rom1P32958 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Rom1P32958 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rom1P32958 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rom1P32958 Gm2308-201ENSMUST00000166539 1004 ntBASIC11.42□□□□□ -0.58
Rom1P32958 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Rom1P32958 Gm8584-201ENSMUST00000171982 758 ntBASIC11.42□□□□□ -0.58
Rom1P32958 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC11.42□□□□□ -0.58
Rom1P32958 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Rom1P32958 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rom1P32958 Gm6296-201ENSMUST00000222599 943 ntBASIC11.42□□□□□ -0.58
Rom1P32958 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rom1P32958 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rom1P32958 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Rom1P32958 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rom1P32958 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Rom1P32958 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rom1P32958 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rom1P32958 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rom1P32958 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Rom1P32958 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rom1P32958 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rom1P32958 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rom1P32958 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rom1P32958 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Rom1P32958 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rom1P32958 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rom1P32958 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rom1P32958 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.42□□□□□ -0.58
Rom1P32958 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rom1P32958 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rom1P32958 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rom1P32958 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rom1P32958 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Rom1P32958 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rom1P32958 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rom1P32958 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rom1P32958 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rom1P32958 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rom1P32958 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rom1P32958 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rom1P32958 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rom1P32958 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rom1P32958 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rom1P32958 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rom1P32958 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rom1P32958 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Rom1P32958 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rom1P32958 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rom1P32958 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rom1P32958 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rom1P32958 Gm6944-201ENSMUST00000182449 1006 ntBASIC11.41□□□□□ -0.58
Rom1P32958 Gm27646-201ENSMUST00000183989 110 ntBASIC11.41□□□□□ -0.58
Rom1P32958 Gm27742-201ENSMUST00000184667 60 ntBASIC11.41□□□□□ -0.58
Rom1P32958 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rom1P32958 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rom1P32958 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rom1P32958 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rom1P32958 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rom1P32958 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Rom1P32958 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rom1P32958 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Rom1P32958 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rom1P32958 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.41□□□□□ -0.58
Rom1P32958 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rom1P32958 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rom1P32958 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rom1P32958 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rom1P32958 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rom1P32958 Gm45003-201ENSMUST00000205875 2158 ntBASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms