Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vcam1P29533 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vcam1P29533 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Vcam1P29533 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vcam1P29533 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Vcam1P29533 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Vcam1P29533 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vcam1P29533 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Vcam1P29533 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Vcam1P29533 Gm15678-201ENSMUST00000117573 960 ntBASIC16.53■□□□□ 0.24
Vcam1P29533 Gm37714-201ENSMUST00000194742 342 ntBASIC16.53■□□□□ 0.24
Vcam1P29533 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vcam1P29533 AC155286.1-201ENSMUST00000218632 448 ntBASIC16.53■□□□□ 0.24
Vcam1P29533 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC16.53■□□□□ 0.24
Vcam1P29533 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vcam1P29533 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Vcam1P29533 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vcam1P29533 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Vcam1P29533 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vcam1P29533 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vcam1P29533 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Vcam1P29533 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Vcam1P29533 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vcam1P29533 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vcam1P29533 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vcam1P29533 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vcam1P29533 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vcam1P29533 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vcam1P29533 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vcam1P29533 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
Vcam1P29533 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Vcam1P29533 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vcam1P29533 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Vcam1P29533 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Vcam1P29533 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vcam1P29533 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vcam1P29533 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Vcam1P29533 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vcam1P29533 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vcam1P29533 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC16.52■□□□□ 0.24
Vcam1P29533 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Vcam1P29533 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Vcam1P29533 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC16.52■□□□□ 0.24
Vcam1P29533 Gm5279-201ENSMUST00000199575 745 ntBASIC16.52■□□□□ 0.24
Vcam1P29533 AC162801.1-201ENSMUST00000220612 198 ntBASIC16.52■□□□□ 0.24
Vcam1P29533 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC16.52■□□□□ 0.24
Vcam1P29533 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC16.52■□□□□ 0.24
Vcam1P29533 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vcam1P29533 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vcam1P29533 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vcam1P29533 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vcam1P29533 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Vcam1P29533 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vcam1P29533 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vcam1P29533 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vcam1P29533 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC16.52■□□□□ 0.23
Vcam1P29533 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vcam1P29533 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Vcam1P29533 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vcam1P29533 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vcam1P29533 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Vcam1P29533 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vcam1P29533 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vcam1P29533 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vcam1P29533 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Vcam1P29533 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vcam1P29533 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Vcam1P29533 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vcam1P29533 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vcam1P29533 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Vcam1P29533 Gm15240-201ENSMUST00000118156 720 ntBASIC16.51■□□□□ 0.23
Vcam1P29533 Gm12341-201ENSMUST00000119724 503 ntBASIC16.51■□□□□ 0.23
Vcam1P29533 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Vcam1P29533 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Vcam1P29533 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vcam1P29533 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC16.51■□□□□ 0.23
Vcam1P29533 AC139350.3-201ENSMUST00000226151 420 ntBASIC16.51■□□□□ 0.23
Vcam1P29533 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Vcam1P29533 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
Vcam1P29533 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vcam1P29533 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC16.51■□□□□ 0.23
Vcam1P29533 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Vcam1P29533 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vcam1P29533 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vcam1P29533 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vcam1P29533 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vcam1P29533 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vcam1P29533 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vcam1P29533 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vcam1P29533 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vcam1P29533 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vcam1P29533 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vcam1P29533 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC16.5■□□□□ 0.23
Vcam1P29533 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vcam1P29533 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC16.5■□□□□ 0.23
Vcam1P29533 Gm18187-201ENSMUST00000196476 984 ntBASIC16.5■□□□□ 0.23
Vcam1P29533 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC16.5■□□□□ 0.23
Vcam1P29533 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vcam1P29533 Gm17795-201ENSMUST00000214505 757 ntBASIC16.5■□□□□ 0.23
Vcam1P29533 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms