Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pde6bP23440 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pde6bP23440 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pde6bP23440 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pde6bP23440 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pde6bP23440 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.78■□□□□ 0.12
Pde6bP23440 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pde6bP23440 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pde6bP23440 Syt7-204ENSMUST00000223586 1344 ntBASIC15.78■□□□□ 0.12
Pde6bP23440 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Pde6bP23440 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pde6bP23440 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Pde6bP23440 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pde6bP23440 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pde6bP23440 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pde6bP23440 Gm7488-201ENSMUST00000117148 684 ntBASIC15.78■□□□□ 0.12
Pde6bP23440 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Pde6bP23440 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC15.78■□□□□ 0.12
Pde6bP23440 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pde6bP23440 Gtpbp10-211ENSMUST00000198799 648 ntBASIC15.78■□□□□ 0.12
Pde6bP23440 AC132863.2-201ENSMUST00000226643 799 ntBASIC15.78■□□□□ 0.12
Pde6bP23440 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pde6bP23440 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pde6bP23440 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pde6bP23440 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pde6bP23440 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.78■□□□□ 0.12
Pde6bP23440 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pde6bP23440 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pde6bP23440 Syt7-205ENSMUST00000224135 1557 ntBASIC15.78■□□□□ 0.12
Pde6bP23440 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Pde6bP23440 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pde6bP23440 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pde6bP23440 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pde6bP23440 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pde6bP23440 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pde6bP23440 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pde6bP23440 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pde6bP23440 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pde6bP23440 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pde6bP23440 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pde6bP23440 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pde6bP23440 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pde6bP23440 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pde6bP23440 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pde6bP23440 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pde6bP23440 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Pde6bP23440 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Pde6bP23440 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pde6bP23440 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15.77■□□□□ 0.12
Pde6bP23440 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC15.77■□□□□ 0.12
Pde6bP23440 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pde6bP23440 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC15.77■□□□□ 0.12
Pde6bP23440 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pde6bP23440 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pde6bP23440 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pde6bP23440 Gm44855-201ENSMUST00000205725 362 ntBASIC15.77■□□□□ 0.12
Pde6bP23440 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC15.77■□□□□ 0.12
Pde6bP23440 Shd-206ENSMUST00000225145 998 ntBASIC15.77■□□□□ 0.12
Pde6bP23440 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pde6bP23440 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Pde6bP23440 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pde6bP23440 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
Pde6bP23440 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.77■□□□□ 0.11
Pde6bP23440 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.77■□□□□ 0.11
Pde6bP23440 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pde6bP23440 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pde6bP23440 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pde6bP23440 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Pde6bP23440 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pde6bP23440 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pde6bP23440 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pde6bP23440 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pde6bP23440 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pde6bP23440 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.76■□□□□ 0.11
Pde6bP23440 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Pde6bP23440 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pde6bP23440 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pde6bP23440 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.76■□□□□ 0.11
Pde6bP23440 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pde6bP23440 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pde6bP23440 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pde6bP23440 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pde6bP23440 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pde6bP23440 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pde6bP23440 Gm4204-201ENSMUST00000110798 1231 ntBASIC15.76■□□□□ 0.11
Pde6bP23440 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pde6bP23440 AC135669.1-201ENSMUST00000213585 412 ntBASIC15.76■□□□□ 0.11
Pde6bP23440 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pde6bP23440 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pde6bP23440 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Pde6bP23440 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pde6bP23440 BC037039-201ENSMUST00000192003 2205 ntBASIC15.76■□□□□ 0.11
Pde6bP23440 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pde6bP23440 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pde6bP23440 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Pde6bP23440 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.76■□□□□ 0.11
Pde6bP23440 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pde6bP23440 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pde6bP23440 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pde6bP23440 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms