Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.88□□□□□ -0.19
BdnfP21237 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
BdnfP21237 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
BdnfP21237 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.88□□□□□ -0.19
BdnfP21237 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
BdnfP21237 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
BdnfP21237 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
BdnfP21237 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
BdnfP21237 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
BdnfP21237 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
BdnfP21237 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
BdnfP21237 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
BdnfP21237 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
BdnfP21237 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
BdnfP21237 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
BdnfP21237 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.87□□□□□ -0.19
BdnfP21237 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
BdnfP21237 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
BdnfP21237 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
BdnfP21237 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
BdnfP21237 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
BdnfP21237 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
BdnfP21237 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
BdnfP21237 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.87□□□□□ -0.19
BdnfP21237 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
BdnfP21237 Mir5131-201ENSMUST00000175426 93 ntBASIC13.87□□□□□ -0.19
BdnfP21237 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.87□□□□□ -0.19
BdnfP21237 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.87□□□□□ -0.19
BdnfP21237 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
BdnfP21237 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
BdnfP21237 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.87□□□□□ -0.19
BdnfP21237 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
BdnfP21237 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
BdnfP21237 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
BdnfP21237 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
BdnfP21237 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
BdnfP21237 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
BdnfP21237 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
BdnfP21237 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
BdnfP21237 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.87□□□□□ -0.19
BdnfP21237 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
BdnfP21237 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
BdnfP21237 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.87□□□□□ -0.19
BdnfP21237 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
BdnfP21237 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.87□□□□□ -0.19
BdnfP21237 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.87□□□□□ -0.19
BdnfP21237 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
BdnfP21237 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
BdnfP21237 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
BdnfP21237 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.86□□□□□ -0.19
BdnfP21237 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
BdnfP21237 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
BdnfP21237 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
BdnfP21237 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
BdnfP21237 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.86□□□□□ -0.19
BdnfP21237 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
BdnfP21237 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
BdnfP21237 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
BdnfP21237 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
BdnfP21237 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.86□□□□□ -0.19
BdnfP21237 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
BdnfP21237 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
BdnfP21237 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
BdnfP21237 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
BdnfP21237 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
BdnfP21237 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
BdnfP21237 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
BdnfP21237 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
BdnfP21237 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.86□□□□□ -0.19
BdnfP21237 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
BdnfP21237 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.86□□□□□ -0.19
BdnfP21237 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.86□□□□□ -0.19
BdnfP21237 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
BdnfP21237 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
BdnfP21237 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
BdnfP21237 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
BdnfP21237 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
BdnfP21237 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
BdnfP21237 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
BdnfP21237 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
BdnfP21237 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
BdnfP21237 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
BdnfP21237 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
BdnfP21237 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
BdnfP21237 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.86□□□□□ -0.19
BdnfP21237 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
BdnfP21237 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
BdnfP21237 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
BdnfP21237 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
BdnfP21237 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
BdnfP21237 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
BdnfP21237 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
BdnfP21237 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
BdnfP21237 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
BdnfP21237 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
BdnfP21237 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
BdnfP21237 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.85□□□□□ -0.19
BdnfP21237 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
BdnfP21237 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
BdnfP21237 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms