Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgn1P18608 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgn1P18608 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.24□□□□□ -0.29
Hmgn1P18608 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgn1P18608 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.24□□□□□ -0.29
Hmgn1P18608 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.24□□□□□ -0.29
Hmgn1P18608 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.24□□□□□ -0.29
Hmgn1P18608 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgn1P18608 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgn1P18608 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgn1P18608 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgn1P18608 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgn1P18608 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgn1P18608 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgn1P18608 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgn1P18608 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgn1P18608 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgn1P18608 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Hmgn1P18608 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgn1P18608 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.24□□□□□ -0.29
Hmgn1P18608 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgn1P18608 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgn1P18608 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgn1P18608 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgn1P18608 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgn1P18608 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgn1P18608 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgn1P18608 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgn1P18608 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.23□□□□□ -0.29
Hmgn1P18608 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgn1P18608 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgn1P18608 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgn1P18608 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgn1P18608 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgn1P18608 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgn1P18608 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Hmgn1P18608 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgn1P18608 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgn1P18608 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgn1P18608 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Hmgn1P18608 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgn1P18608 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.23□□□□□ -0.29
Hmgn1P18608 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Hmgn1P18608 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgn1P18608 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgn1P18608 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgn1P18608 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgn1P18608 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgn1P18608 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgn1P18608 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hmgn1P18608 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Hmgn1P18608 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.22□□□□□ -0.29
Hmgn1P18608 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hmgn1P18608 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hmgn1P18608 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hmgn1P18608 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hmgn1P18608 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hmgn1P18608 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hmgn1P18608 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hmgn1P18608 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Hmgn1P18608 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.22□□□□□ -0.29
Hmgn1P18608 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Hmgn1P18608 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hmgn1P18608 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hmgn1P18608 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.22□□□□□ -0.29
Hmgn1P18608 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hmgn1P18608 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hmgn1P18608 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hmgn1P18608 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.22□□□□□ -0.29
Hmgn1P18608 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hmgn1P18608 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC13.22□□□□□ -0.29
Hmgn1P18608 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.22□□□□□ -0.29
Hmgn1P18608 Gm18669-201ENSMUST00000216049 778 ntBASIC13.22□□□□□ -0.29
Hmgn1P18608 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hmgn1P18608 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hmgn1P18608 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hmgn1P18608 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Hmgn1P18608 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hmgn1P18608 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.22□□□□□ -0.29
Hmgn1P18608 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hmgn1P18608 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hmgn1P18608 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.22□□□□□ -0.29
Hmgn1P18608 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hmgn1P18608 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hmgn1P18608 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Hmgn1P18608 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hmgn1P18608 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hmgn1P18608 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hmgn1P18608 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hmgn1P18608 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hmgn1P18608 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hmgn1P18608 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hmgn1P18608 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hmgn1P18608 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Hmgn1P18608 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hmgn1P18608 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hmgn1P18608 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Hmgn1P18608 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hmgn1P18608 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Hmgn1P18608 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms