Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
P04224 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
P04224 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
P04224 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
P04224 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
P04224 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
P04224 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.71□□□□□ -0.38
P04224 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
P04224 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P04224 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P04224 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
P04224 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
P04224 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P04224 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P04224 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
P04224 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
P04224 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P04224 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
P04224 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
P04224 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
P04224 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P04224 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
P04224 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC12.7□□□□□ -0.38
P04224 Gm4459-201ENSMUST00000118750 468 ntBASIC12.7□□□□□ -0.38
P04224 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
P04224 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
P04224 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P04224 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.7□□□□□ -0.38
P04224 Gm27867-201ENSMUST00000184778 125 ntBASIC12.7□□□□□ -0.38
P04224 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P04224 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
P04224 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
P04224 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P04224 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
P04224 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
P04224 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
P04224 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P04224 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
P04224 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P04224 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.7□□□□□ -0.38
P04224 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
P04224 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
P04224 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
P04224 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
P04224 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
P04224 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
P04224 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
P04224 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
P04224 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
P04224 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
P04224 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
P04224 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
P04224 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
P04224 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
P04224 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
P04224 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
P04224 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
P04224 Gm12008-201ENSMUST00000117791 755 ntBASIC12.69□□□□□ -0.38
P04224 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.69□□□□□ -0.38
P04224 Gm12497-201ENSMUST00000138778 237 ntBASIC12.69□□□□□ -0.38
P04224 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
P04224 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
P04224 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
P04224 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
P04224 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.69□□□□□ -0.38
P04224 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
P04224 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
P04224 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
P04224 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.69□□□□□ -0.38
P04224 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.69□□□□□ -0.38
P04224 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.69□□□□□ -0.38
P04224 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
P04224 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
P04224 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
P04224 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
P04224 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
P04224 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
P04224 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
P04224 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
P04224 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
P04224 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
P04224 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
P04224 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
P04224 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
P04224 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
P04224 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.69□□□□□ -0.38
P04224 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
P04224 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
P04224 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
P04224 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
P04224 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
P04224 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.68□□□□□ -0.38
P04224 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
P04224 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
P04224 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
P04224 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
P04224 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.68□□□□□ -0.38
P04224 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
P04224 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
P04224 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms