Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vti1bO88384 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vti1bO88384 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vti1bO88384 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Vti1bO88384 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vti1bO88384 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vti1bO88384 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vti1bO88384 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vti1bO88384 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vti1bO88384 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vti1bO88384 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vti1bO88384 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
Vti1bO88384 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Vti1bO88384 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vti1bO88384 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vti1bO88384 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vti1bO88384 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vti1bO88384 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vti1bO88384 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
Vti1bO88384 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vti1bO88384 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vti1bO88384 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vti1bO88384 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vti1bO88384 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vti1bO88384 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
Vti1bO88384 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.8□□□□□ -0.2
Vti1bO88384 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.8□□□□□ -0.2
Vti1bO88384 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.8□□□□□ -0.2
Vti1bO88384 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.8□□□□□ -0.2
Vti1bO88384 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.8□□□□□ -0.2
Vti1bO88384 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vti1bO88384 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vti1bO88384 Gm18206-201ENSMUST00000207027 926 ntBASIC13.8□□□□□ -0.2
Vti1bO88384 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vti1bO88384 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vti1bO88384 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vti1bO88384 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vti1bO88384 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Vti1bO88384 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vti1bO88384 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vti1bO88384 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vti1bO88384 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vti1bO88384 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vti1bO88384 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vti1bO88384 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Vti1bO88384 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vti1bO88384 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.8□□□□□ -0.2
Vti1bO88384 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Vti1bO88384 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vti1bO88384 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Vti1bO88384 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1bO88384 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1bO88384 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1bO88384 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1bO88384 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Vti1bO88384 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1bO88384 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1bO88384 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1bO88384 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1bO88384 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1bO88384 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1bO88384 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1bO88384 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1bO88384 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1bO88384 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1bO88384 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Vti1bO88384 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Vti1bO88384 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1bO88384 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1bO88384 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.79□□□□□ -0.2
Vti1bO88384 Gm6443-201ENSMUST00000203599 874 ntBASIC13.79□□□□□ -0.2
Vti1bO88384 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1bO88384 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Vti1bO88384 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1bO88384 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1bO88384 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.79□□□□□ -0.2
Vti1bO88384 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1bO88384 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1bO88384 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.79□□□□□ -0.2
Vti1bO88384 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1bO88384 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.79□□□□□ -0.2
Vti1bO88384 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Vti1bO88384 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1bO88384 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1bO88384 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1bO88384 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1bO88384 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Vti1bO88384 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Vti1bO88384 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1bO88384 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1bO88384 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.79□□□□□ -0.2
Vti1bO88384 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vti1bO88384 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vti1bO88384 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vti1bO88384 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
Vti1bO88384 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Vti1bO88384 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vti1bO88384 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Vti1bO88384 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vti1bO88384 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms