Protein–RNA interactions for Protein: O54949

Nlk, Serine/threonine-protein kinase NLK, mousemouse

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NlkO54949 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC12.96□□□□□ -0.33
NlkO54949 Gm6296-201ENSMUST00000222599 943 ntBASIC12.96□□□□□ -0.33
NlkO54949 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
NlkO54949 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
NlkO54949 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.33
NlkO54949 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.96□□□□□ -0.33
NlkO54949 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.96□□□□□ -0.33
NlkO54949 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NlkO54949 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
NlkO54949 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
NlkO54949 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NlkO54949 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
NlkO54949 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NlkO54949 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NlkO54949 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NlkO54949 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NlkO54949 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.95□□□□□ -0.34
NlkO54949 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.95□□□□□ -0.34
NlkO54949 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
NlkO54949 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
NlkO54949 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NlkO54949 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NlkO54949 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
NlkO54949 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NlkO54949 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NlkO54949 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NlkO54949 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC12.95□□□□□ -0.34
NlkO54949 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NlkO54949 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC12.95□□□□□ -0.34
NlkO54949 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NlkO54949 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC12.95□□□□□ -0.34
NlkO54949 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NlkO54949 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NlkO54949 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NlkO54949 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NlkO54949 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NlkO54949 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NlkO54949 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NlkO54949 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NlkO54949 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NlkO54949 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NlkO54949 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NlkO54949 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.95□□□□□ -0.34
NlkO54949 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NlkO54949 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NlkO54949 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
NlkO54949 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
NlkO54949 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
NlkO54949 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NlkO54949 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.94□□□□□ -0.34
NlkO54949 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NlkO54949 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
NlkO54949 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
NlkO54949 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
NlkO54949 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NlkO54949 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NlkO54949 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
NlkO54949 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
NlkO54949 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
NlkO54949 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NlkO54949 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
NlkO54949 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
NlkO54949 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NlkO54949 Gm25990-201ENSMUST00000102440 86 ntBASIC12.94□□□□□ -0.34
NlkO54949 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NlkO54949 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
NlkO54949 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.94□□□□□ -0.34
NlkO54949 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NlkO54949 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC12.94□□□□□ -0.34
NlkO54949 Gm27646-201ENSMUST00000183989 110 ntBASIC12.94□□□□□ -0.34
NlkO54949 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.94□□□□□ -0.34
NlkO54949 Gm28659-201ENSMUST00000188013 759 ntBASIC12.94□□□□□ -0.34
NlkO54949 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
NlkO54949 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.94□□□□□ -0.34
NlkO54949 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NlkO54949 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NlkO54949 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
NlkO54949 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NlkO54949 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
NlkO54949 Grk6-207ENSMUST00000225925 2769 ntBASIC12.94□□□□□ -0.34
NlkO54949 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NlkO54949 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NlkO54949 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
NlkO54949 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NlkO54949 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.94□□□□□ -0.34
NlkO54949 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NlkO54949 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NlkO54949 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NlkO54949 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NlkO54949 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NlkO54949 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
NlkO54949 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NlkO54949 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.93□□□□□ -0.34
NlkO54949 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
NlkO54949 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NlkO54949 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NlkO54949 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NlkO54949 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
NlkO54949 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
NlkO54949 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 97.3 ms