Protein–RNA interactions for Protein: O35652

Lhx8, LIM/homeobox protein Lhx8, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx8O35652 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lhx8O35652 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lhx8O35652 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Lhx8O35652 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Lhx8O35652 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lhx8O35652 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Lhx8O35652 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx8O35652 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx8O35652 Carlr-201ENSMUST00000181515 2574 ntBASIC14.35□□□□□ -0.11
Lhx8O35652 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx8O35652 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx8O35652 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx8O35652 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx8O35652 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx8O35652 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx8O35652 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Lhx8O35652 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Lhx8O35652 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx8O35652 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Lhx8O35652 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx8O35652 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Lhx8O35652 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx8O35652 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Lhx8O35652 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx8O35652 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Lhx8O35652 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx8O35652 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx8O35652 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx8O35652 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx8O35652 Gm27427-201ENSMUST00000185134 193 ntBASIC14.35□□□□□ -0.11
Lhx8O35652 Gm44982-201ENSMUST00000208795 471 ntBASIC14.35□□□□□ -0.11
Lhx8O35652 Gm9172-201ENSMUST00000212092 954 ntBASIC14.35□□□□□ -0.11
Lhx8O35652 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC14.35□□□□□ -0.11
Lhx8O35652 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx8O35652 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.35□□□□□ -0.11
Lhx8O35652 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Lhx8O35652 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx8O35652 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx8O35652 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Lhx8O35652 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Lhx8O35652 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx8O35652 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx8O35652 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx8O35652 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx8O35652 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx8O35652 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx8O35652 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx8O35652 Gm42651-201ENSMUST00000199851 1339 ntBASIC14.35□□□□□ -0.11
Lhx8O35652 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx8O35652 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.35□□□□□ -0.11
Lhx8O35652 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Lhx8O35652 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx8O35652 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Lhx8O35652 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx8O35652 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Lhx8O35652 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Lhx8O35652 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx8O35652 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx8O35652 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.34□□□□□ -0.11
Lhx8O35652 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx8O35652 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx8O35652 Gm14606-201ENSMUST00000117078 1155 ntBASIC14.34□□□□□ -0.11
Lhx8O35652 Gm11233-201ENSMUST00000122357 634 ntBASIC14.34□□□□□ -0.11
Lhx8O35652 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.34□□□□□ -0.11
Lhx8O35652 Gm25745-201ENSMUST00000174945 133 ntBASIC14.34□□□□□ -0.11
Lhx8O35652 Mir6977-201ENSMUST00000184960 64 ntBASIC14.34□□□□□ -0.11
Lhx8O35652 Gm38254-201ENSMUST00000192276 1009 ntBASIC14.34□□□□□ -0.11
Lhx8O35652 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx8O35652 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC14.34□□□□□ -0.11
Lhx8O35652 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.34□□□□□ -0.11
Lhx8O35652 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC14.34□□□□□ -0.11
Lhx8O35652 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx8O35652 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx8O35652 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx8O35652 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx8O35652 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx8O35652 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx8O35652 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx8O35652 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx8O35652 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx8O35652 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx8O35652 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx8O35652 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.34□□□□□ -0.11
Lhx8O35652 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx8O35652 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx8O35652 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx8O35652 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx8O35652 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx8O35652 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx8O35652 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx8O35652 Platr22-201ENSMUST00000181274 1617 ntTSL 5 BASIC14.33□□□□□ -0.11
Lhx8O35652 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
Lhx8O35652 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Lhx8O35652 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Lhx8O35652 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Lhx8O35652 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Lhx8O35652 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Lhx8O35652 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Lhx8O35652 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.33□□□□□ -0.12
Lhx8O35652 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms