Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc1a6O35544 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc1a6O35544 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
Slc1a6O35544 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc1a6O35544 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Slc1a6O35544 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc1a6O35544 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc1a6O35544 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Slc1a6O35544 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc1a6O35544 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Slc1a6O35544 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc1a6O35544 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.25□□□□□ -0.13
Slc1a6O35544 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc1a6O35544 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Slc1a6O35544 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.25□□□□□ -0.13
Slc1a6O35544 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.25□□□□□ -0.13
Slc1a6O35544 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc1a6O35544 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.25□□□□□ -0.13
Slc1a6O35544 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Slc1a6O35544 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Slc1a6O35544 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc1a6O35544 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Slc1a6O35544 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.25□□□□□ -0.13
Slc1a6O35544 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Slc1a6O35544 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Slc1a6O35544 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.25□□□□□ -0.13
Slc1a6O35544 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.25□□□□□ -0.13
Slc1a6O35544 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc1a6O35544 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc1a6O35544 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Slc1a6O35544 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Slc1a6O35544 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc1a6O35544 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc1a6O35544 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc1a6O35544 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc1a6O35544 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.25□□□□□ -0.13
Slc1a6O35544 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Slc1a6O35544 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc1a6O35544 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc1a6O35544 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc1a6O35544 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc1a6O35544 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Slc1a6O35544 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Slc1a6O35544 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc1a6O35544 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc1a6O35544 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Slc1a6O35544 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc1a6O35544 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc1a6O35544 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc1a6O35544 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc1a6O35544 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc1a6O35544 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc1a6O35544 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc1a6O35544 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc1a6O35544 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc1a6O35544 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc1a6O35544 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.24□□□□□ -0.13
Slc1a6O35544 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.24□□□□□ -0.13
Slc1a6O35544 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc1a6O35544 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc1a6O35544 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Slc1a6O35544 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Slc1a6O35544 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Slc1a6O35544 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc1a6O35544 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc1a6O35544 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc1a6O35544 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Slc1a6O35544 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Slc1a6O35544 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Slc1a6O35544 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc1a6O35544 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc1a6O35544 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc1a6O35544 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.24□□□□□ -0.13
Slc1a6O35544 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Slc1a6O35544 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Slc1a6O35544 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Slc1a6O35544 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc1a6O35544 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.23□□□□□ -0.13
Slc1a6O35544 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc1a6O35544 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc1a6O35544 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc1a6O35544 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.23□□□□□ -0.13
Slc1a6O35544 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc1a6O35544 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc1a6O35544 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.23□□□□□ -0.13
Slc1a6O35544 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Slc1a6O35544 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc1a6O35544 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc1a6O35544 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc1a6O35544 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Slc1a6O35544 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Slc1a6O35544 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.23□□□□□ -0.13
Slc1a6O35544 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.23□□□□□ -0.13
Slc1a6O35544 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Slc1a6O35544 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc1a6O35544 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Slc1a6O35544 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.23□□□□□ -0.13
Slc1a6O35544 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Slc1a6O35544 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc1a6O35544 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms