Protein–RNA interactions for Protein: O35185

Bhlhe40, Class E basic helix-loop-helix protein 40, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bhlhe40O35185 Efs-202ENSMUST00000227037 2540 ntBASIC14.22□□□□□ -0.13
Bhlhe40O35185 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Bhlhe40O35185 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Bhlhe40O35185 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Bhlhe40O35185 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Bhlhe40O35185 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Bhlhe40O35185 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Bhlhe40O35185 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Bhlhe40O35185 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Bhlhe40O35185 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.22□□□□□ -0.13
Bhlhe40O35185 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Bhlhe40O35185 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Bhlhe40O35185 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Bhlhe40O35185 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Bhlhe40O35185 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Bhlhe40O35185 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Bhlhe40O35185 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Bhlhe40O35185 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Bhlhe40O35185 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Bhlhe40O35185 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Bhlhe40O35185 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Bhlhe40O35185 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Bhlhe40O35185 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Bhlhe40O35185 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Bhlhe40O35185 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Bhlhe40O35185 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Bhlhe40O35185 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Bhlhe40O35185 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Bhlhe40O35185 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.21□□□□□ -0.13
Bhlhe40O35185 Gm27838-201ENSMUST00000184829 128 ntBASIC14.21□□□□□ -0.13
Bhlhe40O35185 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Bhlhe40O35185 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Bhlhe40O35185 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Bhlhe40O35185 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Bhlhe40O35185 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Bhlhe40O35185 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Bhlhe40O35185 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Bhlhe40O35185 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Bhlhe40O35185 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Bhlhe40O35185 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Bhlhe40O35185 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Bhlhe40O35185 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Bhlhe40O35185 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Bhlhe40O35185 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.2□□□□□ -0.14
Bhlhe40O35185 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.2□□□□□ -0.14
Bhlhe40O35185 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Bhlhe40O35185 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.2□□□□□ -0.14
Bhlhe40O35185 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Bhlhe40O35185 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Bhlhe40O35185 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.2□□□□□ -0.14
Bhlhe40O35185 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Bhlhe40O35185 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Bhlhe40O35185 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Bhlhe40O35185 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Bhlhe40O35185 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.2□□□□□ -0.14
Bhlhe40O35185 Gm4875-201ENSMUST00000118257 786 ntBASIC14.2□□□□□ -0.14
Bhlhe40O35185 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.2□□□□□ -0.14
Bhlhe40O35185 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.2□□□□□ -0.14
Bhlhe40O35185 Gm23547-201ENSMUST00000158210 271 ntBASIC14.2□□□□□ -0.14
Bhlhe40O35185 Gm44855-201ENSMUST00000205725 362 ntBASIC14.2□□□□□ -0.14
Bhlhe40O35185 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Bhlhe40O35185 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Bhlhe40O35185 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Bhlhe40O35185 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Bhlhe40O35185 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Bhlhe40O35185 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Bhlhe40O35185 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Bhlhe40O35185 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Bhlhe40O35185 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.2□□□□□ -0.14
Bhlhe40O35185 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Bhlhe40O35185 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.2□□□□□ -0.14
Bhlhe40O35185 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.19□□□□□ -0.14
Bhlhe40O35185 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.19□□□□□ -0.14
Bhlhe40O35185 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.19□□□□□ -0.14
Bhlhe40O35185 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.19□□□□□ -0.14
Bhlhe40O35185 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.19□□□□□ -0.14
Bhlhe40O35185 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Bhlhe40O35185 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.19□□□□□ -0.14
Bhlhe40O35185 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Bhlhe40O35185 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.19□□□□□ -0.14
Bhlhe40O35185 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Bhlhe40O35185 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Bhlhe40O35185 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Bhlhe40O35185 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Bhlhe40O35185 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Bhlhe40O35185 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Bhlhe40O35185 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Bhlhe40O35185 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Bhlhe40O35185 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Bhlhe40O35185 Gm15653-201ENSMUST00000119247 907 ntBASIC14.19□□□□□ -0.14
Bhlhe40O35185 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Bhlhe40O35185 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.19□□□□□ -0.14
Bhlhe40O35185 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Bhlhe40O35185 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Bhlhe40O35185 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.19□□□□□ -0.14
Bhlhe40O35185 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Bhlhe40O35185 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Bhlhe40O35185 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Bhlhe40O35185 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.19□□□□□ -0.14
Bhlhe40O35185 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms