Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Polr1aO35134 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC21.85■■□□□ 1.09
Polr1aO35134 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Polr1aO35134 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Polr1aO35134 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Polr1aO35134 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Polr1aO35134 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Polr1aO35134 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC21.84■■□□□ 1.09
Polr1aO35134 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Polr1aO35134 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Polr1aO35134 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Polr1aO35134 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Polr1aO35134 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Polr1aO35134 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Polr1aO35134 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Polr1aO35134 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Polr1aO35134 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC21.84■■□□□ 1.09
Polr1aO35134 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Polr1aO35134 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Polr1aO35134 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Polr1aO35134 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Polr1aO35134 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Polr1aO35134 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Polr1aO35134 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Polr1aO35134 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Polr1aO35134 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Polr1aO35134 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Polr1aO35134 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Polr1aO35134 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Polr1aO35134 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.09
Polr1aO35134 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC21.83■■□□□ 1.09
Polr1aO35134 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Polr1aO35134 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Polr1aO35134 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Polr1aO35134 AC126549.2-201ENSMUST00000223997 1976 ntBASIC21.83■■□□□ 1.09
Polr1aO35134 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Polr1aO35134 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Polr1aO35134 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Polr1aO35134 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Polr1aO35134 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Polr1aO35134 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Polr1aO35134 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Polr1aO35134 Gm18054-201ENSMUST00000207539 555 ntBASIC21.83■■□□□ 1.08
Polr1aO35134 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.08
Polr1aO35134 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
Polr1aO35134 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Polr1aO35134 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Polr1aO35134 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
Polr1aO35134 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Polr1aO35134 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Polr1aO35134 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC21.83■■□□□ 1.08
Polr1aO35134 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Polr1aO35134 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Polr1aO35134 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Polr1aO35134 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Polr1aO35134 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Polr1aO35134 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC21.82■■□□□ 1.08
Polr1aO35134 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC21.82■■□□□ 1.08
Polr1aO35134 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Polr1aO35134 Gm8810-201ENSMUST00000172895 754 ntBASIC21.82■■□□□ 1.08
Polr1aO35134 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC21.82■■□□□ 1.08
Polr1aO35134 Gm9257-201ENSMUST00000221254 232 ntBASIC21.82■■□□□ 1.08
Polr1aO35134 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Polr1aO35134 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Polr1aO35134 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC21.82■■□□□ 1.08
Polr1aO35134 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC21.82■■□□□ 1.08
Polr1aO35134 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Polr1aO35134 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC21.82■■□□□ 1.08
Polr1aO35134 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC21.82■■□□□ 1.08
Polr1aO35134 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
Polr1aO35134 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Polr1aO35134 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Polr1aO35134 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Polr1aO35134 Gm5370-201ENSMUST00000187187 574 ntBASIC21.81■■□□□ 1.08
Polr1aO35134 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Polr1aO35134 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC21.81■■□□□ 1.08
Polr1aO35134 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Polr1aO35134 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
Polr1aO35134 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Polr1aO35134 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Polr1aO35134 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC21.81■■□□□ 1.08
Polr1aO35134 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Polr1aO35134 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC21.8■■□□□ 1.08
Polr1aO35134 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Polr1aO35134 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Polr1aO35134 Gm10156-201ENSMUST00000122364 462 ntBASIC21.8■■□□□ 1.08
Polr1aO35134 Gm29649-201ENSMUST00000185649 419 ntBASIC21.8■■□□□ 1.08
Polr1aO35134 Gm43179-201ENSMUST00000198797 275 ntBASIC21.8■■□□□ 1.08
Polr1aO35134 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Polr1aO35134 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Polr1aO35134 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC21.8■■□□□ 1.08
Polr1aO35134 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Polr1aO35134 Gm42853-201ENSMUST00000201273 1387 ntBASIC21.8■■□□□ 1.08
Polr1aO35134 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Polr1aO35134 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Polr1aO35134 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Polr1aO35134 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Polr1aO35134 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Polr1aO35134 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Polr1aO35134 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms