Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Gm12928-201ENSMUST00000117115 573 ntBASIC16.03■□□□□ 0.16
B020004C17RikJ3QP07 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC16.03■□□□□ 0.16
B020004C17RikJ3QP07 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
B020004C17RikJ3QP07 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
B020004C17RikJ3QP07 Gm7561-201ENSMUST00000211203 886 ntBASIC16.03■□□□□ 0.16
B020004C17RikJ3QP07 AC102291.3-201ENSMUST00000226566 405 ntBASIC16.03■□□□□ 0.16
B020004C17RikJ3QP07 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
B020004C17RikJ3QP07 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
B020004C17RikJ3QP07 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
B020004C17RikJ3QP07 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
B020004C17RikJ3QP07 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
B020004C17RikJ3QP07 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
B020004C17RikJ3QP07 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
B020004C17RikJ3QP07 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
B020004C17RikJ3QP07 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
B020004C17RikJ3QP07 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
B020004C17RikJ3QP07 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
B020004C17RikJ3QP07 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
B020004C17RikJ3QP07 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
B020004C17RikJ3QP07 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
B020004C17RikJ3QP07 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
B020004C17RikJ3QP07 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC16.02■□□□□ 0.16
B020004C17RikJ3QP07 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
B020004C17RikJ3QP07 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
B020004C17RikJ3QP07 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
B020004C17RikJ3QP07 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
B020004C17RikJ3QP07 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
B020004C17RikJ3QP07 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
B020004C17RikJ3QP07 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.02■□□□□ 0.16
B020004C17RikJ3QP07 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
B020004C17RikJ3QP07 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
B020004C17RikJ3QP07 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
B020004C17RikJ3QP07 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
B020004C17RikJ3QP07 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC16.02■□□□□ 0.16
B020004C17RikJ3QP07 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
B020004C17RikJ3QP07 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
B020004C17RikJ3QP07 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
B020004C17RikJ3QP07 Trav4d-2-201ENSMUST00000120914 335 ntBASIC16.02■□□□□ 0.16
B020004C17RikJ3QP07 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC16.02■□□□□ 0.16
B020004C17RikJ3QP07 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC16.02■□□□□ 0.16
B020004C17RikJ3QP07 Gm24420-201ENSMUST00000176676 59 ntBASIC16.02■□□□□ 0.16
B020004C17RikJ3QP07 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC16.02■□□□□ 0.16
B020004C17RikJ3QP07 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC16.02■□□□□ 0.16
B020004C17RikJ3QP07 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
B020004C17RikJ3QP07 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
B020004C17RikJ3QP07 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
B020004C17RikJ3QP07 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
B020004C17RikJ3QP07 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
B020004C17RikJ3QP07 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.02■□□□□ 0.15
B020004C17RikJ3QP07 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
B020004C17RikJ3QP07 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
B020004C17RikJ3QP07 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
B020004C17RikJ3QP07 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
B020004C17RikJ3QP07 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
B020004C17RikJ3QP07 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
B020004C17RikJ3QP07 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
B020004C17RikJ3QP07 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
B020004C17RikJ3QP07 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
B020004C17RikJ3QP07 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
B020004C17RikJ3QP07 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
B020004C17RikJ3QP07 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
B020004C17RikJ3QP07 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.01■□□□□ 0.15
B020004C17RikJ3QP07 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
B020004C17RikJ3QP07 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
B020004C17RikJ3QP07 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
B020004C17RikJ3QP07 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.01■□□□□ 0.15
B020004C17RikJ3QP07 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
B020004C17RikJ3QP07 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
B020004C17RikJ3QP07 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
B020004C17RikJ3QP07 Gm13385-201ENSMUST00000121089 220 ntBASIC16.01■□□□□ 0.15
B020004C17RikJ3QP07 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
B020004C17RikJ3QP07 Gm26464-201ENSMUST00000157094 305 ntBASIC16.01■□□□□ 0.15
B020004C17RikJ3QP07 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
B020004C17RikJ3QP07 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC16.01■□□□□ 0.15
B020004C17RikJ3QP07 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
B020004C17RikJ3QP07 Gm45331-201ENSMUST00000209868 554 ntBASIC16.01■□□□□ 0.15
B020004C17RikJ3QP07 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
B020004C17RikJ3QP07 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
B020004C17RikJ3QP07 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
B020004C17RikJ3QP07 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC16.01■□□□□ 0.15
B020004C17RikJ3QP07 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
B020004C17RikJ3QP07 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
B020004C17RikJ3QP07 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
B020004C17RikJ3QP07 AL645783.1-201ENSMUST00000221416 1832 ntBASIC16.01■□□□□ 0.15
B020004C17RikJ3QP07 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
B020004C17RikJ3QP07 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
B020004C17RikJ3QP07 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC16■□□□□ 0.15
B020004C17RikJ3QP07 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
B020004C17RikJ3QP07 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
B020004C17RikJ3QP07 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
B020004C17RikJ3QP07 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC16■□□□□ 0.15
B020004C17RikJ3QP07 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
B020004C17RikJ3QP07 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
B020004C17RikJ3QP07 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
B020004C17RikJ3QP07 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16■□□□□ 0.15
B020004C17RikJ3QP07 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
B020004C17RikJ3QP07 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16■□□□□ 0.15
B020004C17RikJ3QP07 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
B020004C17RikJ3QP07 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
B020004C17RikJ3QP07 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 91.7 ms