Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hfm1D3Z4R1 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hfm1D3Z4R1 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hfm1D3Z4R1 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Hfm1D3Z4R1 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hfm1D3Z4R1 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Hfm1D3Z4R1 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hfm1D3Z4R1 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hfm1D3Z4R1 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC19.97■□□□□ 0.79
Hfm1D3Z4R1 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hfm1D3Z4R1 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Hfm1D3Z4R1 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Hfm1D3Z4R1 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hfm1D3Z4R1 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hfm1D3Z4R1 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hfm1D3Z4R1 Gm29705-201ENSMUST00000212598 474 ntBASIC19.97■□□□□ 0.79
Hfm1D3Z4R1 Gm45930-201ENSMUST00000221330 292 ntBASIC19.97■□□□□ 0.79
Hfm1D3Z4R1 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Hfm1D3Z4R1 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hfm1D3Z4R1 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hfm1D3Z4R1 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hfm1D3Z4R1 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC19.97■□□□□ 0.79
Hfm1D3Z4R1 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Hfm1D3Z4R1 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC19.97■□□□□ 0.79
Hfm1D3Z4R1 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
Hfm1D3Z4R1 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hfm1D3Z4R1 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hfm1D3Z4R1 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Hfm1D3Z4R1 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hfm1D3Z4R1 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Hfm1D3Z4R1 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hfm1D3Z4R1 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hfm1D3Z4R1 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hfm1D3Z4R1 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hfm1D3Z4R1 Gm15236-201ENSMUST00000117309 379 ntBASIC19.96■□□□□ 0.79
Hfm1D3Z4R1 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC19.96■□□□□ 0.79
Hfm1D3Z4R1 Gm7584-201ENSMUST00000175829 940 ntBASIC19.96■□□□□ 0.79
Hfm1D3Z4R1 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Hfm1D3Z4R1 Gm9124-201ENSMUST00000191789 1092 ntBASIC19.96■□□□□ 0.79
Hfm1D3Z4R1 Gm9113-201ENSMUST00000192510 1018 ntBASIC19.96■□□□□ 0.79
Hfm1D3Z4R1 Gm9131-201ENSMUST00000193557 1089 ntBASIC19.96■□□□□ 0.79
Hfm1D3Z4R1 Gm9121-201ENSMUST00000193749 1071 ntBASIC19.96■□□□□ 0.79
Hfm1D3Z4R1 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC19.96■□□□□ 0.79
Hfm1D3Z4R1 Gm3961-201ENSMUST00000204425 994 ntBASIC19.96■□□□□ 0.79
Hfm1D3Z4R1 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hfm1D3Z4R1 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hfm1D3Z4R1 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hfm1D3Z4R1 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hfm1D3Z4R1 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hfm1D3Z4R1 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hfm1D3Z4R1 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hfm1D3Z4R1 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Hfm1D3Z4R1 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hfm1D3Z4R1 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hfm1D3Z4R1 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hfm1D3Z4R1 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC19.95■□□□□ 0.78
Hfm1D3Z4R1 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hfm1D3Z4R1 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC19.95■□□□□ 0.78
Hfm1D3Z4R1 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hfm1D3Z4R1 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Hfm1D3Z4R1 Gm45880-201ENSMUST00000213041 853 ntBASIC19.95■□□□□ 0.78
Hfm1D3Z4R1 AC155237.1-201ENSMUST00000226196 1279 ntBASIC19.95■□□□□ 0.78
Hfm1D3Z4R1 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hfm1D3Z4R1 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hfm1D3Z4R1 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hfm1D3Z4R1 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hfm1D3Z4R1 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hfm1D3Z4R1 Gm13859-201ENSMUST00000119936 1423 ntBASIC19.95■□□□□ 0.78
Hfm1D3Z4R1 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Hfm1D3Z4R1 Gm42901-201ENSMUST00000197735 3171 ntBASIC19.95■□□□□ 0.78
Hfm1D3Z4R1 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hfm1D3Z4R1 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Hfm1D3Z4R1 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hfm1D3Z4R1 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hfm1D3Z4R1 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hfm1D3Z4R1 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Hfm1D3Z4R1 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hfm1D3Z4R1 Gm13350-201ENSMUST00000120519 479 ntBASIC19.94■□□□□ 0.78
Hfm1D3Z4R1 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Hfm1D3Z4R1 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Hfm1D3Z4R1 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC19.94■□□□□ 0.78
Hfm1D3Z4R1 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hfm1D3Z4R1 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Hfm1D3Z4R1 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hfm1D3Z4R1 Gm27682-201ENSMUST00000183930 110 ntBASIC19.94■□□□□ 0.78
Hfm1D3Z4R1 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
Hfm1D3Z4R1 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hfm1D3Z4R1 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hfm1D3Z4R1 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hfm1D3Z4R1 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Hfm1D3Z4R1 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hfm1D3Z4R1 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Hfm1D3Z4R1 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Hfm1D3Z4R1 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hfm1D3Z4R1 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hfm1D3Z4R1 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hfm1D3Z4R1 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hfm1D3Z4R1 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hfm1D3Z4R1 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hfm1D3Z4R1 Gm14451-201ENSMUST00000121581 1542 ntBASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms