Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tmf1B9EKI3 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tmf1B9EKI3 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC19.53■□□□□ 0.72
Tmf1B9EKI3 Gm45504-201ENSMUST00000211407 2107 ntBASIC19.53■□□□□ 0.72
Tmf1B9EKI3 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC19.53■□□□□ 0.72
Tmf1B9EKI3 Gm9063-201ENSMUST00000223299 582 ntBASIC19.53■□□□□ 0.72
Tmf1B9EKI3 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tmf1B9EKI3 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tmf1B9EKI3 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tmf1B9EKI3 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tmf1B9EKI3 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Tmf1B9EKI3 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tmf1B9EKI3 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tmf1B9EKI3 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tmf1B9EKI3 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tmf1B9EKI3 Gm44981-201ENSMUST00000205549 1943 ntBASIC19.53■□□□□ 0.72
Tmf1B9EKI3 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC19.53■□□□□ 0.72
Tmf1B9EKI3 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tmf1B9EKI3 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tmf1B9EKI3 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tmf1B9EKI3 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Tmf1B9EKI3 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tmf1B9EKI3 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tmf1B9EKI3 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Tmf1B9EKI3 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tmf1B9EKI3 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tmf1B9EKI3 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Tmf1B9EKI3 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Tmf1B9EKI3 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
Tmf1B9EKI3 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC19.52■□□□□ 0.72
Tmf1B9EKI3 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Tmf1B9EKI3 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tmf1B9EKI3 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tmf1B9EKI3 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tmf1B9EKI3 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tmf1B9EKI3 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tmf1B9EKI3 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Tmf1B9EKI3 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tmf1B9EKI3 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tmf1B9EKI3 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tmf1B9EKI3 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tmf1B9EKI3 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tmf1B9EKI3 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Tmf1B9EKI3 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Tmf1B9EKI3 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Tmf1B9EKI3 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Tmf1B9EKI3 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Tmf1B9EKI3 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
Tmf1B9EKI3 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tmf1B9EKI3 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tmf1B9EKI3 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tmf1B9EKI3 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Tmf1B9EKI3 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Tmf1B9EKI3 Gm7775-201ENSMUST00000218871 853 ntBASIC19.51■□□□□ 0.71
Tmf1B9EKI3 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Tmf1B9EKI3 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tmf1B9EKI3 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Tmf1B9EKI3 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tmf1B9EKI3 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tmf1B9EKI3 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Tmf1B9EKI3 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Tmf1B9EKI3 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Tmf1B9EKI3 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Tmf1B9EKI3 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tmf1B9EKI3 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
Tmf1B9EKI3 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Tmf1B9EKI3 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tmf1B9EKI3 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tmf1B9EKI3 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tmf1B9EKI3 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Tmf1B9EKI3 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tmf1B9EKI3 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Tmf1B9EKI3 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tmf1B9EKI3 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Tmf1B9EKI3 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC19.5■□□□□ 0.71
Tmf1B9EKI3 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Tmf1B9EKI3 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tmf1B9EKI3 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tmf1B9EKI3 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Tmf1B9EKI3 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tmf1B9EKI3 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC19.5■□□□□ 0.71
Tmf1B9EKI3 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC19.5■□□□□ 0.71
Tmf1B9EKI3 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC19.5■□□□□ 0.71
Tmf1B9EKI3 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Tmf1B9EKI3 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tmf1B9EKI3 Gm46209-201ENSMUST00000217912 553 ntBASIC19.5■□□□□ 0.71
Tmf1B9EKI3 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC19.5■□□□□ 0.71
Tmf1B9EKI3 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC19.5■□□□□ 0.71
Tmf1B9EKI3 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tmf1B9EKI3 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Tmf1B9EKI3 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tmf1B9EKI3 Gm45630-201ENSMUST00000210243 1911 ntBASIC19.5■□□□□ 0.71
Tmf1B9EKI3 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tmf1B9EKI3 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tmf1B9EKI3 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tmf1B9EKI3 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tmf1B9EKI3 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Tmf1B9EKI3 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tmf1B9EKI3 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tmf1B9EKI3 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms