Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav18A0A075B656 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav18A0A075B656 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav18A0A075B656 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav18A0A075B656 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav18A0A075B656 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC11.86□□□□□ -0.51
Trav18A0A075B656 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav18A0A075B656 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav18A0A075B656 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav18A0A075B656 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav18A0A075B656 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav18A0A075B656 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav18A0A075B656 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav18A0A075B656 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC11.86□□□□□ -0.51
Trav18A0A075B656 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav18A0A075B656 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav18A0A075B656 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC11.86□□□□□ -0.51
Trav18A0A075B656 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC11.86□□□□□ -0.51
Trav18A0A075B656 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav18A0A075B656 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav18A0A075B656 AC164565.1-201ENSMUST00000217520 1484 ntBASIC11.86□□□□□ -0.51
Trav18A0A075B656 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav18A0A075B656 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav18A0A075B656 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav18A0A075B656 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Trav18A0A075B656 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav18A0A075B656 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav18A0A075B656 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav18A0A075B656 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav18A0A075B656 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav18A0A075B656 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav18A0A075B656 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav18A0A075B656 AC166574.6-201ENSMUST00000227889 1806 ntBASIC11.86□□□□□ -0.51
Trav18A0A075B656 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav18A0A075B656 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav18A0A075B656 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav18A0A075B656 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav18A0A075B656 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav18A0A075B656 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav18A0A075B656 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav18A0A075B656 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav18A0A075B656 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav18A0A075B656 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav18A0A075B656 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav18A0A075B656 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav18A0A075B656 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav18A0A075B656 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Trav18A0A075B656 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav18A0A075B656 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC11.85□□□□□ -0.51
Trav18A0A075B656 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav18A0A075B656 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav18A0A075B656 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav18A0A075B656 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav18A0A075B656 Olfr286-202ENSMUST00000205305 969 ntBASIC11.85□□□□□ -0.51
Trav18A0A075B656 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav18A0A075B656 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav18A0A075B656 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav18A0A075B656 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav18A0A075B656 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav18A0A075B656 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav18A0A075B656 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav18A0A075B656 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav18A0A075B656 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav18A0A075B656 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav18A0A075B656 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trav18A0A075B656 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC11.85□□□□□ -0.51
Trav18A0A075B656 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav18A0A075B656 Gm43399-201ENSMUST00000202546 2374 ntBASIC11.85□□□□□ -0.51
Trav18A0A075B656 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav18A0A075B656 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav18A0A075B656 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav18A0A075B656 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav18A0A075B656 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav18A0A075B656 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav18A0A075B656 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav18A0A075B656 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav18A0A075B656 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav18A0A075B656 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav18A0A075B656 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Trav18A0A075B656 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav18A0A075B656 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav18A0A075B656 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.84□□□□□ -0.51
Trav18A0A075B656 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav18A0A075B656 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav18A0A075B656 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Trav18A0A075B656 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Trav18A0A075B656 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav18A0A075B656 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav18A0A075B656 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav18A0A075B656 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trav18A0A075B656 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav18A0A075B656 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC11.84□□□□□ -0.51
Trav18A0A075B656 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC11.84□□□□□ -0.51
Trav18A0A075B656 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav18A0A075B656 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC11.84□□□□□ -0.51
Trav18A0A075B656 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav18A0A075B656 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav18A0A075B656 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC11.84□□□□□ -0.51
Trav18A0A075B656 Gm10154-201ENSMUST00000084445 354 ntBASIC11.84□□□□□ -0.51
Trav18A0A075B656 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms