Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb2S4R1M3 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb2S4R1M3 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb2S4R1M3 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
H2afb2S4R1M3 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb2S4R1M3 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb2S4R1M3 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
H2afb2S4R1M3 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb2S4R1M3 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb2S4R1M3 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb2S4R1M3 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
H2afb2S4R1M3 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb2S4R1M3 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb2S4R1M3 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
H2afb2S4R1M3 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb2S4R1M3 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb2S4R1M3 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
H2afb2S4R1M3 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb2S4R1M3 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb2S4R1M3 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb2S4R1M3 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb2S4R1M3 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb2S4R1M3 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.49□□□□□ -0.09
H2afb2S4R1M3 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.49□□□□□ -0.09
H2afb2S4R1M3 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.49□□□□□ -0.09
H2afb2S4R1M3 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.49□□□□□ -0.09
H2afb2S4R1M3 Gm43514-201ENSMUST00000198852 424 ntBASIC14.49□□□□□ -0.09
H2afb2S4R1M3 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.49□□□□□ -0.09
H2afb2S4R1M3 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb2S4R1M3 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb2S4R1M3 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb2S4R1M3 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb2S4R1M3 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb2S4R1M3 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb2S4R1M3 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb2S4R1M3 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb2S4R1M3 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb2S4R1M3 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb2S4R1M3 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
H2afb2S4R1M3 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb2S4R1M3 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb2S4R1M3 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb2S4R1M3 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb2S4R1M3 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb2S4R1M3 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb2S4R1M3 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb2S4R1M3 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
H2afb2S4R1M3 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
H2afb2S4R1M3 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
H2afb2S4R1M3 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb2S4R1M3 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
H2afb2S4R1M3 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb2S4R1M3 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb2S4R1M3 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.48□□□□□ -0.09
H2afb2S4R1M3 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb2S4R1M3 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb2S4R1M3 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb2S4R1M3 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb2S4R1M3 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb2S4R1M3 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.48□□□□□ -0.09
H2afb2S4R1M3 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb2S4R1M3 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.48□□□□□ -0.09
H2afb2S4R1M3 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb2S4R1M3 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb2S4R1M3 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
H2afb2S4R1M3 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb2S4R1M3 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
H2afb2S4R1M3 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb2S4R1M3 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.48□□□□□ -0.09
H2afb2S4R1M3 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.48□□□□□ -0.09
H2afb2S4R1M3 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
H2afb2S4R1M3 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
H2afb2S4R1M3 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb2S4R1M3 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
H2afb2S4R1M3 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
H2afb2S4R1M3 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb2S4R1M3 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb2S4R1M3 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb2S4R1M3 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.47□□□□□ -0.09
H2afb2S4R1M3 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb2S4R1M3 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb2S4R1M3 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb2S4R1M3 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb2S4R1M3 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb2S4R1M3 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.47□□□□□ -0.09
H2afb2S4R1M3 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.47□□□□□ -0.09
H2afb2S4R1M3 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.47□□□□□ -0.09
H2afb2S4R1M3 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb2S4R1M3 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.47□□□□□ -0.09
H2afb2S4R1M3 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.47□□□□□ -0.09
H2afb2S4R1M3 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb2S4R1M3 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.47□□□□□ -0.09
H2afb2S4R1M3 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
H2afb2S4R1M3 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb2S4R1M3 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb2S4R1M3 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb2S4R1M3 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
H2afb2S4R1M3 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
H2afb2S4R1M3 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.47□□□□□ -0.09
H2afb2S4R1M3 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms