Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.99□□□□□ -0.01
Smarcb1Q9Z0H3 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcb1Q9Z0H3 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcb1Q9Z0H3 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcb1Q9Z0H3 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcb1Q9Z0H3 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcb1Q9Z0H3 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Smarcb1Q9Z0H3 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcb1Q9Z0H3 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcb1Q9Z0H3 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Smarcb1Q9Z0H3 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcb1Q9Z0H3 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcb1Q9Z0H3 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Smarcb1Q9Z0H3 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.99□□□□□ -0.01
Smarcb1Q9Z0H3 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcb1Q9Z0H3 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcb1Q9Z0H3 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcb1Q9Z0H3 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Smarcb1Q9Z0H3 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcb1Q9Z0H3 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcb1Q9Z0H3 Gm12585-201ENSMUST00000117307 290 ntBASIC14.99□□□□□ -0.01
Smarcb1Q9Z0H3 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.99□□□□□ -0.01
Smarcb1Q9Z0H3 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcb1Q9Z0H3 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Smarcb1Q9Z0H3 Gm33320-201ENSMUST00000192232 530 ntBASIC14.99□□□□□ -0.01
Smarcb1Q9Z0H3 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.99□□□□□ -0.01
Smarcb1Q9Z0H3 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcb1Q9Z0H3 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcb1Q9Z0H3 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.99□□□□□ -0.01
Smarcb1Q9Z0H3 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcb1Q9Z0H3 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcb1Q9Z0H3 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcb1Q9Z0H3 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcb1Q9Z0H3 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcb1Q9Z0H3 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcb1Q9Z0H3 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcb1Q9Z0H3 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcb1Q9Z0H3 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcb1Q9Z0H3 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcb1Q9Z0H3 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcb1Q9Z0H3 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcb1Q9Z0H3 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcb1Q9Z0H3 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Smarcb1Q9Z0H3 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcb1Q9Z0H3 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcb1Q9Z0H3 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcb1Q9Z0H3 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcb1Q9Z0H3 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Smarcb1Q9Z0H3 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.98□□□□□ -0.01
Smarcb1Q9Z0H3 Gm29667-201ENSMUST00000190817 490 ntBASIC14.98□□□□□ -0.01
Smarcb1Q9Z0H3 Gm6916-202ENSMUST00000205523 195 ntBASIC14.98□□□□□ -0.01
Smarcb1Q9Z0H3 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcb1Q9Z0H3 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.98□□□□□ -0.01
Smarcb1Q9Z0H3 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcb1Q9Z0H3 Gm20445-201ENSMUST00000061905 565 ntBASIC14.98□□□□□ -0.01
Smarcb1Q9Z0H3 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcb1Q9Z0H3 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.98□□□□□ -0.01
Smarcb1Q9Z0H3 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Smarcb1Q9Z0H3 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcb1Q9Z0H3 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcb1Q9Z0H3 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.98□□□□□ -0.01
Smarcb1Q9Z0H3 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcb1Q9Z0H3 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcb1Q9Z0H3 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcb1Q9Z0H3 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcb1Q9Z0H3 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.98□□□□□ -0.01
Smarcb1Q9Z0H3 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcb1Q9Z0H3 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcb1Q9Z0H3 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcb1Q9Z0H3 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcb1Q9Z0H3 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcb1Q9Z0H3 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Smarcb1Q9Z0H3 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
Smarcb1Q9Z0H3 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcb1Q9Z0H3 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcb1Q9Z0H3 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcb1Q9Z0H3 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.97□□□□□ -0.01
Smarcb1Q9Z0H3 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcb1Q9Z0H3 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Smarcb1Q9Z0H3 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Smarcb1Q9Z0H3 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Smarcb1Q9Z0H3 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcb1Q9Z0H3 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcb1Q9Z0H3 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcb1Q9Z0H3 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcb1Q9Z0H3 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Smarcb1Q9Z0H3 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcb1Q9Z0H3 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcb1Q9Z0H3 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcb1Q9Z0H3 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Smarcb1Q9Z0H3 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcb1Q9Z0H3 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcb1Q9Z0H3 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
Smarcb1Q9Z0H3 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcb1Q9Z0H3 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcb1Q9Z0H3 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcb1Q9Z0H3 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Smarcb1Q9Z0H3 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcb1Q9Z0H3 Gm2423-201ENSMUST00000074863 733 ntBASIC14.97□□□□□ -0.01
Smarcb1Q9Z0H3 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms