Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl28Q9JIL2 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl28Q9JIL2 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl28Q9JIL2 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl28Q9JIL2 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl28Q9JIL2 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Ccl28Q9JIL2 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl28Q9JIL2 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ccl28Q9JIL2 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC11.72□□□□□ -0.53
Ccl28Q9JIL2 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl28Q9JIL2 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl28Q9JIL2 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ccl28Q9JIL2 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl28Q9JIL2 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl28Q9JIL2 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ccl28Q9JIL2 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl28Q9JIL2 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Ccl28Q9JIL2 AC131743.5-201ENSMUST00000220775 1618 ntBASIC11.71□□□□□ -0.53
Ccl28Q9JIL2 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl28Q9JIL2 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl28Q9JIL2 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl28Q9JIL2 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl28Q9JIL2 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Ccl28Q9JIL2 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl28Q9JIL2 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC11.71□□□□□ -0.53
Ccl28Q9JIL2 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Ccl28Q9JIL2 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl28Q9JIL2 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.71□□□□□ -0.53
Ccl28Q9JIL2 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl28Q9JIL2 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl28Q9JIL2 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl28Q9JIL2 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC11.71□□□□□ -0.53
Ccl28Q9JIL2 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Ccl28Q9JIL2 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC11.71□□□□□ -0.53
Ccl28Q9JIL2 Gm27300-201ENSMUST00000184085 97 ntBASIC11.71□□□□□ -0.53
Ccl28Q9JIL2 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC11.71□□□□□ -0.53
Ccl28Q9JIL2 Gm27335-201ENSMUST00000184758 97 ntBASIC11.71□□□□□ -0.53
Ccl28Q9JIL2 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl28Q9JIL2 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl28Q9JIL2 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC11.71□□□□□ -0.53
Ccl28Q9JIL2 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccl28Q9JIL2 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ccl28Q9JIL2 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccl28Q9JIL2 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Ccl28Q9JIL2 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccl28Q9JIL2 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccl28Q9JIL2 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccl28Q9JIL2 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ccl28Q9JIL2 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccl28Q9JIL2 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccl28Q9JIL2 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Ccl28Q9JIL2 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.71□□□□□ -0.54
Ccl28Q9JIL2 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccl28Q9JIL2 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccl28Q9JIL2 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Ccl28Q9JIL2 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Ccl28Q9JIL2 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl28Q9JIL2 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl28Q9JIL2 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl28Q9JIL2 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl28Q9JIL2 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ccl28Q9JIL2 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl28Q9JIL2 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Ccl28Q9JIL2 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl28Q9JIL2 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl28Q9JIL2 Mmp14-206ENSMUST00000225641 3238 ntBASIC11.7□□□□□ -0.54
Ccl28Q9JIL2 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl28Q9JIL2 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl28Q9JIL2 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl28Q9JIL2 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl28Q9JIL2 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Ccl28Q9JIL2 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl28Q9JIL2 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC11.7□□□□□ -0.54
Ccl28Q9JIL2 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl28Q9JIL2 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC11.7□□□□□ -0.54
Ccl28Q9JIL2 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl28Q9JIL2 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl28Q9JIL2 Mir5126-201ENSMUST00000175513 77 ntBASIC11.7□□□□□ -0.54
Ccl28Q9JIL2 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Ccl28Q9JIL2 Gm27628-201ENSMUST00000184911 107 ntBASIC11.7□□□□□ -0.54
Ccl28Q9JIL2 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC11.7□□□□□ -0.54
Ccl28Q9JIL2 Gm9449-201ENSMUST00000207265 1011 ntBASIC11.7□□□□□ -0.54
Ccl28Q9JIL2 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC11.7□□□□□ -0.54
Ccl28Q9JIL2 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl28Q9JIL2 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl28Q9JIL2 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl28Q9JIL2 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Ccl28Q9JIL2 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl28Q9JIL2 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl28Q9JIL2 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Ccl28Q9JIL2 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl28Q9JIL2 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl28Q9JIL2 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl28Q9JIL2 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.7□□□□□ -0.54
Ccl28Q9JIL2 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl28Q9JIL2 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl28Q9JIL2 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl28Q9JIL2 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl28Q9JIL2 Gm4081-201ENSMUST00000195287 1838 ntBASIC11.7□□□□□ -0.54
Ccl28Q9JIL2 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms