Protein–RNA interactions for Protein: Q9DCN7

Rnft1, E3 ubiquitin-protein ligase RNFT1, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1Q9DCN7 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnft1Q9DCN7 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Rnft1Q9DCN7 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnft1Q9DCN7 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnft1Q9DCN7 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnft1Q9DCN7 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.18□□□□□ -0.14
Rnft1Q9DCN7 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rnft1Q9DCN7 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnft1Q9DCN7 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.18□□□□□ -0.14
Rnft1Q9DCN7 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.18□□□□□ -0.14
Rnft1Q9DCN7 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Rnft1Q9DCN7 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnft1Q9DCN7 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnft1Q9DCN7 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnft1Q9DCN7 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnft1Q9DCN7 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnft1Q9DCN7 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnft1Q9DCN7 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnft1Q9DCN7 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnft1Q9DCN7 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Rnft1Q9DCN7 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.17□□□□□ -0.14
Rnft1Q9DCN7 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnft1Q9DCN7 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Rnft1Q9DCN7 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Rnft1Q9DCN7 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnft1Q9DCN7 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnft1Q9DCN7 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnft1Q9DCN7 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnft1Q9DCN7 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnft1Q9DCN7 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.17□□□□□ -0.14
Rnft1Q9DCN7 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnft1Q9DCN7 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.17□□□□□ -0.14
Rnft1Q9DCN7 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Rnft1Q9DCN7 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.17□□□□□ -0.14
Rnft1Q9DCN7 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Rnft1Q9DCN7 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.17□□□□□ -0.14
Rnft1Q9DCN7 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Rnft1Q9DCN7 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.17□□□□□ -0.14
Rnft1Q9DCN7 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnft1Q9DCN7 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.17□□□□□ -0.14
Rnft1Q9DCN7 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.17□□□□□ -0.14
Rnft1Q9DCN7 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.17□□□□□ -0.14
Rnft1Q9DCN7 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnft1Q9DCN7 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Rnft1Q9DCN7 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnft1Q9DCN7 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnft1Q9DCN7 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnft1Q9DCN7 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnft1Q9DCN7 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnft1Q9DCN7 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnft1Q9DCN7 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.17□□□□□ -0.14
Rnft1Q9DCN7 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnft1Q9DCN7 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.16□□□□□ -0.14
Rnft1Q9DCN7 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnft1Q9DCN7 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnft1Q9DCN7 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnft1Q9DCN7 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnft1Q9DCN7 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnft1Q9DCN7 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnft1Q9DCN7 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnft1Q9DCN7 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnft1Q9DCN7 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnft1Q9DCN7 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnft1Q9DCN7 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnft1Q9DCN7 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnft1Q9DCN7 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.16□□□□□ -0.14
Rnft1Q9DCN7 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnft1Q9DCN7 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.16□□□□□ -0.14
Rnft1Q9DCN7 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Rnft1Q9DCN7 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.16□□□□□ -0.14
Rnft1Q9DCN7 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.16□□□□□ -0.14
Rnft1Q9DCN7 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnft1Q9DCN7 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnft1Q9DCN7 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnft1Q9DCN7 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnft1Q9DCN7 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnft1Q9DCN7 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnft1Q9DCN7 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnft1Q9DCN7 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnft1Q9DCN7 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnft1Q9DCN7 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnft1Q9DCN7 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnft1Q9DCN7 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnft1Q9DCN7 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnft1Q9DCN7 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnft1Q9DCN7 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnft1Q9DCN7 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnft1Q9DCN7 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnft1Q9DCN7 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnft1Q9DCN7 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnft1Q9DCN7 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnft1Q9DCN7 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.15□□□□□ -0.14
Rnft1Q9DCN7 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rnft1Q9DCN7 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.15□□□□□ -0.14
Rnft1Q9DCN7 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnft1Q9DCN7 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnft1Q9DCN7 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnft1Q9DCN7 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Rnft1Q9DCN7 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnft1Q9DCN7 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms