Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Sf3a3Q9D554 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3a3Q9D554 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3a3Q9D554 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3a3Q9D554 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Sf3a3Q9D554 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3a3Q9D554 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3a3Q9D554 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3a3Q9D554 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3a3Q9D554 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Sf3a3Q9D554 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3a3Q9D554 Gm10499-201ENSMUST00000174094 934 ntBASIC14.69□□□□□ -0.06
Sf3a3Q9D554 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.69□□□□□ -0.06
Sf3a3Q9D554 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.69□□□□□ -0.06
Sf3a3Q9D554 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.69□□□□□ -0.06
Sf3a3Q9D554 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.69□□□□□ -0.06
Sf3a3Q9D554 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3a3Q9D554 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Sf3a3Q9D554 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3a3Q9D554 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3a3Q9D554 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3a3Q9D554 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3a3Q9D554 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3a3Q9D554 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Sf3a3Q9D554 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3a3Q9D554 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3a3Q9D554 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.69□□□□□ -0.06
Sf3a3Q9D554 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Sf3a3Q9D554 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sf3a3Q9D554 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sf3a3Q9D554 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sf3a3Q9D554 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sf3a3Q9D554 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sf3a3Q9D554 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sf3a3Q9D554 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sf3a3Q9D554 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sf3a3Q9D554 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sf3a3Q9D554 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Sf3a3Q9D554 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sf3a3Q9D554 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.68□□□□□ -0.06
Sf3a3Q9D554 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sf3a3Q9D554 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Sf3a3Q9D554 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Sf3a3Q9D554 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sf3a3Q9D554 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sf3a3Q9D554 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.68□□□□□ -0.06
Sf3a3Q9D554 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.68□□□□□ -0.06
Sf3a3Q9D554 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.68□□□□□ -0.06
Sf3a3Q9D554 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.68□□□□□ -0.06
Sf3a3Q9D554 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sf3a3Q9D554 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.68□□□□□ -0.06
Sf3a3Q9D554 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Sf3a3Q9D554 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sf3a3Q9D554 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Sf3a3Q9D554 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Sf3a3Q9D554 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sf3a3Q9D554 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sf3a3Q9D554 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sf3a3Q9D554 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sf3a3Q9D554 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sf3a3Q9D554 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sf3a3Q9D554 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.68□□□□□ -0.06
Sf3a3Q9D554 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Sf3a3Q9D554 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sf3a3Q9D554 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sf3a3Q9D554 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.68□□□□□ -0.06
Sf3a3Q9D554 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.68□□□□□ -0.06
Sf3a3Q9D554 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sf3a3Q9D554 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sf3a3Q9D554 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.67□□□□□ -0.06
Sf3a3Q9D554 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3a3Q9D554 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3a3Q9D554 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Sf3a3Q9D554 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3a3Q9D554 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3a3Q9D554 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3a3Q9D554 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3a3Q9D554 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3a3Q9D554 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3a3Q9D554 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3a3Q9D554 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3a3Q9D554 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3a3Q9D554 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Sf3a3Q9D554 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3a3Q9D554 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.67□□□□□ -0.06
Sf3a3Q9D554 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.67□□□□□ -0.06
Sf3a3Q9D554 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3a3Q9D554 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3a3Q9D554 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3a3Q9D554 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3a3Q9D554 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3a3Q9D554 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.67□□□□□ -0.06
Sf3a3Q9D554 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3a3Q9D554 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3a3Q9D554 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3a3Q9D554 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Sf3a3Q9D554 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3a3Q9D554 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3a3Q9D554 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3a3Q9D554 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms