Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smc3Q9CW03 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smc3Q9CW03 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Smc3Q9CW03 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Smc3Q9CW03 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smc3Q9CW03 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smc3Q9CW03 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smc3Q9CW03 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smc3Q9CW03 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.04■□□□□ 0.32
Smc3Q9CW03 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.04■□□□□ 0.32
Smc3Q9CW03 Gm6944-201ENSMUST00000182449 1006 ntBASIC17.04■□□□□ 0.32
Smc3Q9CW03 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Smc3Q9CW03 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smc3Q9CW03 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smc3Q9CW03 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smc3Q9CW03 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smc3Q9CW03 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smc3Q9CW03 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smc3Q9CW03 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Smc3Q9CW03 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smc3Q9CW03 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smc3Q9CW03 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Smc3Q9CW03 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smc3Q9CW03 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smc3Q9CW03 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smc3Q9CW03 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smc3Q9CW03 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smc3Q9CW03 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Smc3Q9CW03 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smc3Q9CW03 Gm28182-201ENSMUST00000188354 2477 ntBASIC17.04■□□□□ 0.32
Smc3Q9CW03 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smc3Q9CW03 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smc3Q9CW03 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smc3Q9CW03 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smc3Q9CW03 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smc3Q9CW03 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Smc3Q9CW03 Gm44291-201ENSMUST00000203102 2865 ntBASIC17.03■□□□□ 0.32
Smc3Q9CW03 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smc3Q9CW03 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Smc3Q9CW03 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Smc3Q9CW03 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smc3Q9CW03 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smc3Q9CW03 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC17.03■□□□□ 0.32
Smc3Q9CW03 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.03■□□□□ 0.32
Smc3Q9CW03 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.03■□□□□ 0.32
Smc3Q9CW03 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smc3Q9CW03 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.03■□□□□ 0.32
Smc3Q9CW03 Gm16026-204ENSMUST00000162652 683 ntBASIC17.03■□□□□ 0.32
Smc3Q9CW03 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smc3Q9CW03 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.03■□□□□ 0.32
Smc3Q9CW03 Gm18195-201ENSMUST00000207604 706 ntBASIC17.03■□□□□ 0.32
Smc3Q9CW03 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17.03■□□□□ 0.32
Smc3Q9CW03 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC17.03■□□□□ 0.32
Smc3Q9CW03 Gm10154-201ENSMUST00000084445 354 ntBASIC17.03■□□□□ 0.32
Smc3Q9CW03 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Smc3Q9CW03 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smc3Q9CW03 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Smc3Q9CW03 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Smc3Q9CW03 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smc3Q9CW03 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smc3Q9CW03 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Smc3Q9CW03 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC17.03■□□□□ 0.32
Smc3Q9CW03 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smc3Q9CW03 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smc3Q9CW03 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smc3Q9CW03 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smc3Q9CW03 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smc3Q9CW03 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smc3Q9CW03 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Smc3Q9CW03 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Smc3Q9CW03 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smc3Q9CW03 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
Smc3Q9CW03 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smc3Q9CW03 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smc3Q9CW03 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Smc3Q9CW03 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.02■□□□□ 0.32
Smc3Q9CW03 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.02■□□□□ 0.32
Smc3Q9CW03 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC17.02■□□□□ 0.32
Smc3Q9CW03 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smc3Q9CW03 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.32
Smc3Q9CW03 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smc3Q9CW03 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
Smc3Q9CW03 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smc3Q9CW03 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smc3Q9CW03 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC17.02■□□□□ 0.31
Smc3Q9CW03 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smc3Q9CW03 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smc3Q9CW03 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smc3Q9CW03 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Smc3Q9CW03 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smc3Q9CW03 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smc3Q9CW03 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smc3Q9CW03 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smc3Q9CW03 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smc3Q9CW03 Gm38391-201ENSMUST00000191720 4069 ntBASIC17.01■□□□□ 0.31
Smc3Q9CW03 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smc3Q9CW03 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.01■□□□□ 0.31
Smc3Q9CW03 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smc3Q9CW03 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smc3Q9CW03 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms