Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim8Q99PJ2 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim8Q99PJ2 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim8Q99PJ2 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim8Q99PJ2 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim8Q99PJ2 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim8Q99PJ2 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.22□□□□□ -0.13
Trim8Q99PJ2 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim8Q99PJ2 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trim8Q99PJ2 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trim8Q99PJ2 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim8Q99PJ2 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim8Q99PJ2 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Trim8Q99PJ2 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim8Q99PJ2 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim8Q99PJ2 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trim8Q99PJ2 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trim8Q99PJ2 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim8Q99PJ2 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Trim8Q99PJ2 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.21□□□□□ -0.13
Trim8Q99PJ2 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.21□□□□□ -0.13
Trim8Q99PJ2 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim8Q99PJ2 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trim8Q99PJ2 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim8Q99PJ2 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.21□□□□□ -0.13
Trim8Q99PJ2 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim8Q99PJ2 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trim8Q99PJ2 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trim8Q99PJ2 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim8Q99PJ2 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim8Q99PJ2 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim8Q99PJ2 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim8Q99PJ2 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim8Q99PJ2 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trim8Q99PJ2 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim8Q99PJ2 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim8Q99PJ2 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim8Q99PJ2 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim8Q99PJ2 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim8Q99PJ2 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim8Q99PJ2 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim8Q99PJ2 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim8Q99PJ2 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.2□□□□□ -0.14
Trim8Q99PJ2 Gm4899-201ENSMUST00000178708 719 ntBASIC14.2□□□□□ -0.14
Trim8Q99PJ2 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trim8Q99PJ2 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.2□□□□□ -0.14
Trim8Q99PJ2 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim8Q99PJ2 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Trim8Q99PJ2 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim8Q99PJ2 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim8Q99PJ2 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.2□□□□□ -0.14
Trim8Q99PJ2 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim8Q99PJ2 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim8Q99PJ2 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim8Q99PJ2 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim8Q99PJ2 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim8Q99PJ2 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim8Q99PJ2 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim8Q99PJ2 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim8Q99PJ2 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trim8Q99PJ2 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.2□□□□□ -0.14
Trim8Q99PJ2 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.2□□□□□ -0.14
Trim8Q99PJ2 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim8Q99PJ2 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim8Q99PJ2 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Trim8Q99PJ2 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim8Q99PJ2 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.19□□□□□ -0.14
Trim8Q99PJ2 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Trim8Q99PJ2 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trim8Q99PJ2 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim8Q99PJ2 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
Trim8Q99PJ2 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim8Q99PJ2 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim8Q99PJ2 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Trim8Q99PJ2 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim8Q99PJ2 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Trim8Q99PJ2 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim8Q99PJ2 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim8Q99PJ2 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim8Q99PJ2 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trim8Q99PJ2 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim8Q99PJ2 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim8Q99PJ2 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.19□□□□□ -0.14
Trim8Q99PJ2 Gm44771-201ENSMUST00000206975 626 ntBASIC14.19□□□□□ -0.14
Trim8Q99PJ2 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.19□□□□□ -0.14
Trim8Q99PJ2 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim8Q99PJ2 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trim8Q99PJ2 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.19□□□□□ -0.14
Trim8Q99PJ2 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Trim8Q99PJ2 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Trim8Q99PJ2 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim8Q99PJ2 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim8Q99PJ2 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trim8Q99PJ2 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.19□□□□□ -0.14
Trim8Q99PJ2 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim8Q99PJ2 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim8Q99PJ2 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim8Q99PJ2 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim8Q99PJ2 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim8Q99PJ2 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms